Results 1 to 10 of about 820,988 (298)

Protein subcellular localization prediction tools

Computational and Structural Biotechnology Journal
Protein subcellular localization prediction is of great significance in bioinformatics and biological research. Most of the proteins do not have experimentally determined localization information, computational prediction methods and tools have been ...
Maryam Gillani, Gianluca Pollastri
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A review from biological mapping to computation-based subcellular localization

Molecular Therapy: Nucleic Acids, 2023
Subcellular localization is crucial to the study of virus and diseases. Specifically, research on protein subcellular localization can help identify clues between virus and host cells that can aid in the design of targeted drugs.
Jing Li, Quan Zou, Lei Yuan
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Refining protein subcellular localization. [PDF]

PLoS Computational Biology, 2005
The study of protein subcellular localization is important to elucidate protein function. Even in well-studied organisms such as yeast, experimental methods have not been able to provide a full coverage of localization.
Michelle S Scott, Sara J Calafell, David Y Thomas, Michael T Hallett   +3 more
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Research progress on subcellular localization and function of long non-coding RNA [PDF]

Jichu yixue yu linchuang, 2023
The subcellular localization of long non-coding RNA(lncRNA) is closely related to its function. When localized in the nucleus, lncRNA can maintain chromatin structure, regulate gene transcription and participate in variable splicing of mRNA.
SU Yue, LIANG Linhui, HE Xianghuo
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Gm-PLoc: A Subcellular Localization Model of Multi-Label Protein Based on GAN and DeepFM

Frontiers in Genetics, 2022
Identifying the subcellular localization of a given protein is an essential part of biological and medical research, since the protein must be localized in the correct organelle to ensure physiological function.
Liwen Wu, Liwen Wu, Song Gao, Song Gao, Shaowen Yao, Shaowen Yao, Feng Wu, Feng Wu, Jie Li, Jie Li, Yunyun Dong, Yunyun Dong, Yunqi Zhang, Yunqi Zhang, Yunqi Zhang   +14 more
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Subcellular Localization of CIAPIN1 [PDF]

Journal of Histochemistry & Cytochemistry, 2006
Cytokine-induced apoptosis inhibitor 1 (CIAPIN1) is a newly identified anti-apoptotic molecule. Our previous studies have demonstrated that CIAPIN1 is ubiquitously expressed in normal fetal and adult human tissues and confers multidrug resistance in gastric cancer cells, possibly by upregulating the expression of multidrug resistance gene 1 and ...
Zhiming, Hao, Xiaohua, Li, Taidong, Qiao, Rui, Du, Guoyun, Zhang, Daiming, Fan   +5 more
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Application of RNA subcellular fraction estimation method to explore RNA localization regulation

G3: Genes, Genomes, Genetics, 2021
RNA localization is involved in multiple biological processes. Recent advances in subcellular fractionation-based sequencing approaches uncovered localization pattern on a global scale. Most of existing methods adopt relative localization ratios (such as
Xiaomin Dai, Yangmengjie Li, Weizhen Liu, Xiuqi Pan, Chenyue Guo, Xiaojing Zhao, Jingwen Lv, Haixin Lei, Liye Zhang   +8 more
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CELLO2GO: a web server for protein subCELlular LOcalization prediction with functional gene ontology annotation. [PDF]

PLoS ONE, 2014
CELLO2GO (http://cello.life.nctu.edu.tw/cello2go/) is a publicly available, web-based system for screening various properties of a targeted protein and its subcellular localization.
Chin-Sheng Yu, Chih-Wen Cheng, Wen-Chi Su, Kuei-Chung Chang, Shao-Wei Huang, Jenn-Kang Hwang, Chih-Hao Lu   +6 more
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MULocDeep: A deep-learning framework for protein subcellular and suborganellar localization prediction with residue-level interpretation

Computational and Structural Biotechnology Journal, 2021
Prediction of protein localization plays an important role in understanding protein function and mechanisms. In this paper, we propose a general deep learning-based localization prediction framework, MULocDeep, which can predict multiple localizations of
Yuexu Jiang, Duolin Wang, Yifu Yao, Holger Eubel, Patrick Künzler, Ian Max Møller, Dong Xu   +6 more
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Protein Subcellular Localization in Bacteria [PDF]

Cold Spring Harbor Perspectives in Biology, 2010
Like their eukaryotic counterparts, bacterial cells have a highly organized internal architecture. Here, we address the question of how proteins localize to particular sites in the cell and how they do so in a dynamic manner. We consider the underlying mechanisms that govern the positioning of proteins and protein complexes in the examples of the ...
David Z, Rudner, Richard, Losick
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