Protein subcellular localization prediction tools [PDF]
Computational and Structural Biotechnology JournalProtein subcellular localization prediction is of great significance in bioinformatics and biological research. Most of the proteins do not have experimentally determined localization information, computational prediction methods and tools have been ...
Maryam Gillani, Gianluca Pollastri
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Molecular Therapy, 2021 The functions of mRNA are closely correlated with their locations in cells. Knowledge about the subcellular locations of mRNA is helpful to understand their biological functions.
Qiang Tang, Juanjuan Kang, Wei Chen
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BUSCA: An integrative web server to predict subcellular localization of proteins [PDF]
Nucleic Acids Res., 2018 Here, we present BUSCA (http://busca.biocomp.unibo.it), a novel web server that integrates different computational tools for predicting protein subcellular localization.
Casadio, Rita +4 more
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Subcellular Localization of miRNAs and Implications in Cellular Homeostasis
Genes, 2021 MicroRNAs (miRNAs) are thought to act as post-transcriptional regulators in the cytoplasm by either dampening translation or stimulating degradation of target mRNAs.
Minwen Jie, Tong Feng, Wei Huang
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CELLO2GO: a web server for protein subCELlular LOcalization prediction with functional gene ontology annotation. [PDF]
PLoS ONE, 2014 CELLO2GO (http://cello.life.nctu.edu.tw/cello2go/) is a publicly available, web-based system for screening various properties of a targeted protein and its subcellular localization.
Chin-Sheng Yu +6 more
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A Novel Protein Subcellular Localization Method With CNN-XGBoost Model for Alzheimer's Disease
Frontiers in Genetics, 2019 The disorder distribution of protein in the compartment or organelle leads to many human diseases, including neurodegenerative diseases such as Alzheimer's disease.
Long Pang +4 more
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Recent Advances in the Prediction of Subcellular Localization of Proteins and Related Topics
Frontiers in Bioinformatics, 2022 Prediction of subcellular localization of proteins from their amino acid sequences has a long history in bioinformatics and is still actively developing, incorporating the latest advances in machine learning and proteomics.
Kenta Nakai, Leyi Wei
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PSI: a comprehensive and integrative approach for accurate plant subcellular localization prediction. [PDF]
PLoS ONE, 2013 Predicting the subcellular localization of proteins conquers the major drawbacks of high-throughput localization experiments that are costly and time-consuming. However, current subcellular localization predictors are limited in scope and accuracy.
Lili Liu +3 more
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A Novel Synthetic Tag Induces Palmitoylation and Directs the Subcellular Localization of Target Proteins [PDF]
BiomoleculesProper subcellular localization is essential to exert the designated function of a protein, not only for endogenous proteins but also transgene-encoded proteins.
Jun Ka +4 more
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Research progress on subcellular localization and function of long non-coding RNA [PDF]
Jichu yixue yu linchuang, 2023 The subcellular localization of long non-coding RNA(lncRNA) is closely related to its function. When localized in the nucleus, lncRNA can maintain chromatin structure, regulate gene transcription and participate in variable splicing of mRNA.
SU Yue, LIANG Linhui, HE Xianghuo
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