Protein subcellular localization prediction tools [PDF]
Computational and Structural Biotechnology JournalProtein subcellular localization prediction is of great significance in bioinformatics and biological research. Most of the proteins do not have experimentally determined localization information, computational prediction methods and tools have been ...
Maryam Gillani, Gianluca Pollastri
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Identification of Protein Subcellular Localization With Network and Functional Embeddings [PDF]
Frontiers in Genetics, 2021 The functions of proteins are mainly determined by their subcellular localizations in cells. Currently, many computational methods for predicting the subcellular localization of proteins have been proposed.
Xiaoyong Pan +7 more
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Green Fluorescent Protein- and Discosoma sp. Red Fluorescent Protein-Tagged Organelle Marker Lines for Protein Subcellular Localization in Rice [PDF]
Frontiers in Plant Science, 2019 The subcellular localization of proteins is a fundamental aspect of protein functions. Determining the subcellular localization is important for understanding the biological functions of proteins.
Ziqiang Chen +14 more
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CELLO2GO: a web server for protein subCELlular LOcalization prediction with functional gene ontology annotation. [PDF]
PLoS ONE, 2014 CELLO2GO (http://cello.life.nctu.edu.tw/cello2go/) is a publicly available, web-based system for screening various properties of a targeted protein and its subcellular localization.
Chin-Sheng Yu +6 more
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LocPro: A deep learning-based prediction of protein subcellular localization for promoting multi-directional pharmaceutical research [PDF]
Journal of Pharmaceutical AnalysisDrug development encompasses multiple processes, wherein protein subcellular localization is essential. It promotes target identification, treatment development, and the design of drug delivery systems.
Yintao Zhang +9 more
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A Novel Protein Subcellular Localization Method With CNN-XGBoost Model for Alzheimer's Disease [PDF]
Frontiers in Genetics, 2019 The disorder distribution of protein in the compartment or organelle leads to many human diseases, including neurodegenerative diseases such as Alzheimer's disease.
Long Pang +4 more
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Bird Eye View of Protein Subcellular Localization Prediction [PDF]
Life, 2020 Proteins are made up of long chain of amino acids that perform a variety of functions in different organisms. The activity of the proteins is determined by the nucleotide sequence of their genes and by its 3D structure.
Ravindra Kumar, Sandeep Kumar Dhanda
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Automated classification of protein subcellular localization in immunohistochemistry images to reveal biomarkers in colon cancer [PDF]
BMC Bioinformatics, 2020 Background Protein biomarkers play important roles in cancer diagnosis. Many efforts have been made on measuring abnormal expression intensity in biological samples to identity cancer types and stages.
Zhen-Zhen Xue +4 more
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Predicting human protein subcellular localization by heterogeneous and comprehensive approaches. [PDF]
PLoS ONE, 2017 Drug development and investigation of protein function both require an understanding of protein subcellular localization. We developed a system, REALoc, that can predict the subcellular localization of singleplex and multiplex proteins in humans.
Chi-Hua Tung +3 more
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Technologies to measure and modulate protein subcellular localization. [PDF]
Nat Rev Mol Cell BiolLeineweber W +4 more
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