Results 101 to 110 of about 1,284,441 (182)

Unlocking natural history collections to improve eDNA reference databases and biodiversity monitoring. [PDF]

Bioscience
Schmid S, Straube N, Albouy C, Delling B, Maclaine J, Matschiner M, Møller PR, Nocita A, Palandačić A, Rüber L, Sonnewald M, Alvarez N, Manel S, Pellissier L.   +13 more
europepmc   +1 more source

metagenomeFeatures: an R package for working with 16S rRNA reference databases and marker-gene survey feature data. [PDF]

Bioinformatics, 2019
Olson ND, Shah N, Kancherla J, Wagner J, Paulson JN, Corrada Bravo H.   +5 more
europepmc   +1 more source

A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases. [PDF]

J Comput Biol, 2018
Jain C, Dilthey A, Koren S, Aluru S, Phillippy AM.   +4 more
europepmc   +1 more source

Investigating fungal diversity through metabarcoding for environmental samples: assessment of ITS1 and ITS2 Illumina sequencing using multiple defined mock communities with different classification methods and reference databases. [PDF]

BMC Genomics
Winand R, D'hooge E, Van Uffelen A, Bogaerts B, Van Braekel J, Hoffman S, Roosens NHCJ, Becker P, De Keersmaecker SCJ, Vanneste K.   +9 more
europepmc   +1 more source

Strategies to improve reference databases for soil microbiomes. [PDF]

ISME J, 2017
Choi J, Yang F, Stepanauskas R, Cardenas E, Garoutte A, Williams R, Flater J, Tiedje JM, Hofmockel KS, Gelder B, Howe A.   +10 more
europepmc   +1 more source

phyloBARCODER: A Web Tool for Phylogenetic Classification of Eukaryote Metabarcodes Using Custom Reference Databases. [PDF]

Mol Biol Evol
Inoue J, Shinzato C, Hirai J, Itoh S, Minegishi Y, Ito SI, Hyodo S.   +6 more
europepmc   +1 more source

Influence of Different Reference Databases on Categorization of Bone Mineral Density: A Study on Rural Postmenopausal Women from Southern India. [PDF]

Indian J Endocrinol Metab, 2018
Cherian KE, Kapoor N, Asha HS, Thomas N, Paul TV.   +4 more
europepmc   +1 more source

Optimizing microbiome reference databases with PacBio full-length 16S rRNA sequencing for enhanced taxonomic classification and biomarker discovery. [PDF]

Front Microbiol
Han H, Choi YH, Kim SY, Park JH, Chung J, Na HS.   +5 more
europepmc   +1 more source

Pathogenic ASXL1 somatic variants in reference databases complicate germline variant interpretation for Bohring-Opitz Syndrome. [PDF]

Hum Mutat, 2017
Carlston CM, O'Donnell-Luria AH, Underhill HR, Cummings BB, Weisburd B, Minikel EV, Birnbaum DP, Exome Aggregation Consortium, Tvrdik T, MacArthur DG, Mao R.   +10 more
europepmc   +1 more source

Decision criteria for MALDI-TOF MS-based identification of filamentous fungi using commercial and in-house reference databases. [PDF]

BMC Microbiol, 2017
Normand AC, Normand AC, Cassagne C, Gautier M, Becker P, Ranque S, Hendrickx M, Piarroux R.   +7 more
europepmc   +1 more source