Results 221 to 230 of about 781,120 (260)

Multiplatform comparisons and annotation of structural variants highlight the utility of the T2T reference genome in human diagnostics. [PDF]

Gigascience
Savara J, Novosad T, Gajdos P, Petrackova A, Behalek M, Manakova J, Ctvrtlik F, Minarik J, Papajik T, Kriegova E.   +9 more
europepmc   +1 more source

Updated resource of 180K soybean SNP genotyping array based on the T2T reference genome. [PDF]

PLoS One
Hwang JH, Lee S, Lee JS, Kim KD.
europepmc   +1 more source

Reference genome and population genomic analyses reveal insight into herbicide tolerance in Avena fatua L. [PDF]

Nat Commun
Liu J, Liu N, Yan W, Hu X, Wang M, Qin R, Ma L, Li W, Wang Y, Sun Q, Xing L, Yun Y, Li Y, Yan J, Wang X, Gong Z, Wang H, Du H.   +17 more
europepmc   +1 more source

A de novo reference genome of the golden jackal, Canis aureus

Winter S, Meißner R, Prost S, Greve C, Gerheim C, Arakelyan M, Aghayan S, Ghazaryan A, Hatlauf J, Hatlauf J, Burger PA.   +10 more
europepmc   +1 more source

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Reference genomes for conservation

Science, 2022
High-quality reference genomes for non–model species can benefit ...
Sadye, Paez, Robert H S, Kraus, Beth, Shapiro, M Thomas P, Gilbert, Erich D, Jarvis, Farooq Omar, Al-Ajli, Gerardo, Ceballos, Andrew J, Crawford, Olivier, Fedrigo, Rebecca N, Johnson, Warren E, Johnson, Tomas, Marques-Bonet, Phillip A, Morin, Ralf C, Mueller, Oliver A, Ryder, Emma C, Teeling, Byrappa, Venkatesh   +16 more
openaire   +2 more sources

Beyond the reference genome

Nature Biotechnology, 2015
Both strands of a diploid genome can now be efficiently sequenced de novo, unlocking the diversity of the human gene pool.
Carlos D, Bustamante, Morten, Rasmussen
openaire   +2 more sources

Building Population-Specific Reference Genomes: A Case Study of Vietnamese Reference Genome

2015 Seventh International Conference on Knowledge and Systems Engineering (KSE), 2015
The human reference genome is an essential tool for studying human genomes. The standard reference genome is constructed from genomes of a few donors. The 1000 genomes project has revealed a huge amount of genetic differences between diverse populations.
Nguyen Dai Thanh, Pham Thi Minh Trang, Dang Thanh Hai, Nguyen Ha Anh Tuan, Si Quang Le, Bui Quang Minh, Quang Minh Dao, Pham Bao Son, Le Sy Vinh   +8 more
openaire   +2 more sources

Crop Genomics Goes Beyond a Single Reference Genome

Trends in Plant Science, 2019
The inadequacy of a single reference genome to capture the full landscape of genetic diversity within a species constrains exploration of genetic variation for crop improvement. A recent study by Yang et al. has demonstrated the value of multiple reference-quality genomes in capturing structural variants and guiding biological discovery.
Tao, Yongfu, Jordan, David R., Mace, Emma S.   +2 more
openaire   +5 more sources

Going beyond a reference genome in conservation genomics

Trends in Ecology & Evolution
The current biodiversity crisis demands scientifically based management. The generation of reference genomes is crucial in conservation, but is not enough to capture species diversity. By incorporating whole-genome sequencing (WGS) at the population level, Nigenda-Morales et al.
Cinta Pegueroles, Marta Pascual, Carlos Carreras   +2 more
openaire   +2 more sources

The effect of reference species on reference-guided genome assembly

Proceedings of the 8th International Conference on Computational Systems-Biology and Bioinformatics, 2017
The rapid improvement of the next-generation sequencing (NGS) technologies has enabled unprecedented production of huge DNA sequence data at low cost. However, the NGS technologies are still limited to generate short DNA sequences, which has led to the development of many assembly algorithms to recover whole genome sequences from those short sequences.
Juyeon Kim, Daehwan Lee, Mikang Sim, Jongin Lee, Jaebum Kim   +4 more
openaire   +1 more source