Results 11 to 20 of about 2,532,187 (254)

A series of PDB-related databanks for everyday needs

Nucleic Acids Res., 2014
We present a series of databanks (http://swift.cmbi.ru.nl/gv/facilities/) that hold information that is computationally derived from Protein Data Bank (PDB) entries and that might augment macromolecular structure studies.
Wouter G. Touw, Coos A. B. Baakman, Jon Black, Tim A. H. te Beek, E. Krieger, R. Joosten, G. Vriend   +6 more
semanticscholar   +1 more source

Hysterectomy for Recurrent/Residual Cervical Cancer Following Definitive Radiotherapy [PDF]

In Vivo, 2020
Radical hysterectomy has been used for local recurrent or persistent (LR) cervical cancer after radiotherapy (RT), but the rate of serious complications is high and tolerance is low. This study determined the efficacy, safety, and prognostic factors of adjuvant simple hysterectomy in LR cervical cancer post-RT.A total of 21 patients who underwent ...
Tadaharu, Nakasone, Yusuke, Taira, Yuko, Shimoji, Yoshihisa, Arakaki, Tomoko, Nakamoto, Takuma, Ooyama, Wataru, Kudaka, Itomi, Kaneshima, Kumiko, Nishihira, Keiko, Mekaru, Yoichi, Aoki   +10 more
openaire   +2 more sources

ANARCI: antigen receptor numbering and receptor classification

Bioinform., 2015
Motivation: Antibody amino-acid sequences can be numbered to identify equivalent positions. Such annotations are valuable for antibody sequence comparison, protein structure modelling and engineering. Multiple different numbering schemes exist, they vary
James Dunbar, C. Deane
semanticscholar   +1 more source

An organic matter database (OMD): consolidating global residue data from agriculture, fisheries, forestry and related industries

Earth System Science Data
. Agricultural, fishery, forestry and agro-processing activities produce large quantities of residues, by-products and waste materials every year. Inappropriate disposal and inefficient use of these resources contribute to greenhouse gas emissions and ...
Gudeta Weldesemayat Sileshi, Edmundo Barrios, Johannes Lehmann, F. Tubiello   +3 more
semanticscholar   +1 more source

RING 4.0: faster residue interaction networks with novel interaction types across over 35,000 different chemical structures

Nucleic Acids Research
Residue interaction networks (RINs) are a valuable approach for representing contacts in protein structures. RINs have been widely used in various research areas, including the analysis of mutation effects, domain-domain communication, catalytic activity,
Alessio Del Conte, Giorgia F. Camagni, Damiano Clementel, Giovanni Minervini, A. Monzon, Carlo Ferrari, D. Piovesan, Silvio C. E. Tosatto   +7 more
semanticscholar   +1 more source

Predicting Residue-Residue Contacts and Helix-Helix Interactions in Transmembrane Proteins Using an Integrative Feature-Based Random Forest Approach

PLoS ONE, 2011
Integral membrane proteins constitute 25–30% of genomes and play crucial roles in many biological processes. However, less than 1% of membrane protein structures are in the Protein Data Bank.
Xiaofei Wang, Zhen Chen, Chuan Wang, Ren-Xiang Yan, Ziding Zhang, Jiangning Song   +5 more
semanticscholar   +1 more source

Targeted review of the maximum residue levels (MRLs) for ethephon

EFSA journal. European Food Safety Authority
In accordance with Article 43 of Regulation (EC) 396/2005, EFSA received a request from the European Commission to perform a targeted review of the existing maximum residue levels (MRLs) for ethephon which are based on revoked codex maximum residue ...

semanticscholar   +1 more source

Carcinomas and Carcinoid Tumors of the Lungs and Bronchi in Children and Adolescents: The EXPeRT Recommendations

Pediatric Blood &Cancer, EarlyView.
ABSTRACT Primary lung carcinomas and bronchial carcinoid tumors (BC) are very rare malignancies in childhood. While typical BC and mucoepidermoid carcinomas are mostly low‐grade, localized tumors with a more favorable prognosis than in adults, necessitating avoidance of overtreatment, adenocarcinomas of the lung are often diagnosed at advanced disease ...
Michael Abele, Calogero Virgone, Michaela Kuhlen, Sabine Irtan, Yves Reguerre, Malgorzata Krawczyk, Ewa Bien, Tal Ben‐Ami, Maja Cesen, Ricardo Lopez‐Almaraz, Andrea Ferrari, Gianni Bisogno, Dominik T. Schneider, Abbas Agaimy, Constantin Lapa, Hubert Ducou le Pointe, Rainer Claus, Catherine Daniel, Ines B. Brecht, Daniel Orbach   +19 more
wiley   +1 more source

Amino acid empirical contact energy definitions for fold recognition in the space of contact maps

BMC Bioinformatics, 2003
BackgroundContradicting evidence has been presented in the literature concerning the effectiveness of empirical contact energies for fold recognition. Empirical contact energies are calculated on the basis of information available from selected protein ...
M. Berrera, H. Molinari, F. Fogolari
semanticscholar   +1 more source

European Standard Clinical Practice Guideline and EXPeRT Recommendations for the Diagnosis and Management of Gastroenteropancreatic Neuroendocrine Neoplasms in Children and Adolescents

Pediatric Blood &Cancer, EarlyView.
ABSTRACT Pediatric gastroenteropancreatic neuroendocrine neoplasms (GEP‐NENs) are extremely rare and clinically heterogeneous. Management has largely been extrapolated from adult practice. This European Standard Clinical Practice Guideline (ESCP), developed by the EXPeRT network in collaboration with adult NEN experts, provides (adult) evidence ...
Michaela Kuhlen, Calogero Virgone, Antje Redlich, Michael Abele, Ricardo Lopez‐Almaraz, Tal Ben‐Ami, Ewa Bien, Gianni Bisogno, Maja Mazic Cesen, Andrea Ferrari, Malgorzata A. Krawczyk, Yves Reguerre, Dominik T. Schneider, Ines B. Brecht, Charlotte Rigaud, Bilgehan Yalcin, Rainer Claus, Christian Vokuhl, Constantin Lapa, Jörg Fuchs, Segolene Hescot, Thomas Walter, Julien Hadoux, Daniel Orbach   +23 more
wiley   +1 more source