Results 131 to 140 of about 19,820 (248)

Resistome SNP Calling via Read Colored de Bruijn Graphs

, 2017
MotivationThe resistome, which refers to all of the antimicrobial resistance (AMR) genes in pathogenic and non-pathogenic bacteria, is frequently studied using shotgun metagenomic data [14, 47].
Martin D. Muggli, Noelle Noyes, Musa Jundi, Christina Boucher, Bahar Alipanahi   +4 more
core   +1 more source

Viral metagenome reveals microbial hosts and the associated antibiotic resistome on microplastics

Nature Water
Microplastics provide a unique niche for viruses, promoting viral interactions with hosts and accelerating the rapid ‘horizontal’ spread of antibiotic resistance genes (ARGs).
Ruilong Li, Xin-Li An, Yi-Jin Wang, Zhu-Gen Yang, Jian-Qiang Su, Jonathan M. Cooper, Yong-Guan Zhu   +6 more
semanticscholar   +1 more source

Antimicrobial Resistance in Nontyphoidal Salmonella and Clinically Relevant Enterococcus From Faecal Samples of Conservation‐Priority Captive Ungulates in a United Arab Emirates Urban Zoo: A Cross‐Sectional Baseline Study

Environmental Microbiology Reports, Volume 18, Issue 5, October 2026.
Targeted faecal surveillance of conservation‐priority captive ungulates identified multidrug‐resistant nontyphoidal Salmonella and clinically relevant Enterococcus in a UAE urban zoo. These findings provide cross‐sectional baseline evidence supporting cautious integration of zoo‐based monitoring into One Health antimicrobial resistance surveillance ...
Ihab Habib, Moneeb A. Qablan, Fatema Aaref Alzaabi, Fatema Rashed Alnuaimi, Ghalya Ahmed Almemari, Glindya Bhagya Lakshmi, Safeya Al Naqbi, Fatima Al Shamsi, Dhanya Vijay, John Mhongovoyo, Sultan Khalifa Alkaabi, Amna Mana Alotaiba   +11 more
wiley   +1 more source

Metagenomic Bioprospecting of Bioremediation‐Related Genes in Amazonian Aquatic Ecosystems

Environmental Microbiology Reports, Volume 18, Issue 5, October 2026.
Overview of the study workflow and main findings. Metagenomes from Amazonian rivers in Pará, Brazil (Altamira, Bragança, Marabá and Paragominas) were processed through DNA extraction and quality control, followed by bioinformatic read processing and functional annotation to build a curated catalogue of 546 bioremediation genes from 80 microbial species.
Thais Mayara Castro dos Anjos, Daralyns Borges Macedo, Victor Benedito Costa Ferreira, Carlos Willian Dias Dantas, Edian Franklin Franco de Los Santos, Oscar Victor Cardenas‐Alegria, Rommel Thiago Jucá Ramos   +6 more
wiley   +1 more source

Plastiome: Plastisphere-enriched mobile resistome in aquatic environments.

Journal of Hazardous Materials
Aquatic microplastics (MPs) act as reservoirs for microbial communities, fostering the formation of a mobile resistome encompassing diverse antibiotic (ARGs) and biocide/metal resistance genes (BMRGs), and mobile genetic elements (MGEs).
K. S. Guruge, P. Goswami, Kazuki Kanda, Amila Abeynayaka, Masahiko Kumagai, Mafumi Watanabe, Yukino Tamamura-Andoh   +6 more
semanticscholar   +1 more source

Antibiotic susceptibility profiles of MDR K. pneumoniae isolates subjected to resistome analysis.

, 2018
Antibiotic susceptibility profiles of MDR K. pneumoniae isolates subjected to resistome analysis.
Matthew A. Crawford (237008), Erum Khan (361745), Ruth E. Timme (187846), Shashi K. Sharma (5352863), David R. Hodge (5352857), Molly A. Hughes (237030), Segaran P. Pillai (4726284), Christine Lascols (5352869), Kevin Anderson (2055208), Stephen A. Morse (5352866), Marc W. Allard (278119), Debra J. Fisher (5352860), Sara Lomonaco (4023854)   +12 more
core   +1 more source

Metagenomic Insight into Sulfonamide-Induced Variation in Antibiotic Resistome of Soil Associated with Taxonomy, Mobile Genetic Elements (MGEs), and Function

, 2021
Antibiotic resistance genes (ARGs) are emerging environmental pollutants, and the effect of both abiotic (e.g., anthropogenic pollutants such as sulfonamides (SAs)) and biotic (e.g., microbial community (taxonomy), mobile genetic elements (MGEs)) factors
Xiaoyu Xiao (2366371), Cui Hu (199286), Lingling Rong (8563362), Lingling Rong, Cui Hu, Xiaoming Zou, Mi Li (237587), Ligui Wu, Mi Li, Haihui Tang (11858092), Xiaoming Zou (483445), Ligui Wu (6527105), Xiaoyu Xiao, Tiao Zhang (2709073), Haihui Tang, Zhangsong Jiang (11858089), Zhangsong Jiang, Taijia Li, Taijia Li (11858095), Tiao Zhang   +19 more
core   +1 more source

Unraveling the Amycolatopsis tucumanensis copper-resistome

BioMetals, 2012
Heavy metal pollution is widespread causing serious ecological problems in many parts of the world; especially in developing countries where a budget for remediation technology is not affordable. Therefore, screening for microbes with high accumulation capacities and studying their stable resistance characteristics is advisable to define cost-effective
Dávila Costa, José Sebastián, Kothe, Erika, Abate, Carlos Mauricio, Amoroso, Maria Julia del R.   +3 more
openaire   +3 more sources

The gut resistome in infancy: A systematic review [PDF]

The infant gut microbiome alongside the resistome play central roles in infants' health, with the composition of the microbiome strongly influencing the resistome, emphasizing the crucial interplay between microbial ecology and antimicrobial resistance ...
Harr, Martin, Dretvik, Fredrik Bruvoll
core  

Additional file 8 of PangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains

, 2021
Additional file 8: Table S7.
Hsuan-Lin Her (11678727), Po-Ting Lin (11678730), Yu-Wei Wu (16196)   +2 more
core   +1 more source