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RiboSimR: A Tool for Simulation and Power Analysis of Ribo-seq Data
2020RNA-seq and Ribo-seq are widespread quantitative methods for assessing transcription and translation. They can be used to detect differential expression, differential translation, and differential translation efficiency between conditions. The statistical power to detect differential genes is affected by multiple factors, such as the number of ...
Patrick Perkins +3 more
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Journal of Genetics and Genomics
Translation is a crucial step in gene expression. Over the past decade, the development and application of Ribosome profiling (Ribo-seq) have significantly advanced our understanding of translational regulation in vivo. However, the analysis and visualization of Ribo-seq data remain challenging. Despite the availability of various analytical pipelines,
Shuchao Ren, Yinan Li, Zhipeng Zhou
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Translation is a crucial step in gene expression. Over the past decade, the development and application of Ribosome profiling (Ribo-seq) have significantly advanced our understanding of translational regulation in vivo. However, the analysis and visualization of Ribo-seq data remain challenging. Despite the availability of various analytical pipelines,
Shuchao Ren, Yinan Li, Zhipeng Zhou
openaire +2 more sources
Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria
Science, 2016Daniel Dar +2 more
exaly
GWIPS-viz: development of a ribo-seq genome browser
Nucleic Acids Research, 2014Audrey M Michel +2 more
exaly
The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity
Cell, 2017Gerald C Tiu +2 more
exaly
α-l-ribo-Configured Locked Nucleic Acid (α-L-LNA): Synthesis and Properties
Journal of the American Chemical Society, 2002Piet Herdewijn, Jesper Wengel
exaly