Results 1 to 10 of about 1,641,518 (378)

Structural basis of ribosomal RNA transcription regulation

Nature Communications, 2021
Ribosomal RNA (rRNA) expression is regulated at the initiation stage of RNA synthesis. Here, the authors report cryo-EM structures of E. coli RNA polymerase and rRNA promoter complex with DksA/ppGpp on the way to open complex formation, identifying key ...
Yeonoh Shin, M. Zuhaib Qayyum, Danil Pupov, Daria Esyunina, Andrey Kulbachinskiy, Katsuhiko S. Murakami   +5 more
doaj   +2 more sources

Transcription-translation coupling: direct interactions of RNA polymerase with ribosomes and ribosomal subunits. [PDF]

Nucleic Acids Research, 2017
In prokaryotes, RNA polymerase and ribosomes can bind concurrently to the same RNA transcript, leading to the functional coupling of transcription and translation.
Blaha, Gregor M, Conn, Adam B, Diggs, Stephen, Fan, Haitian, Gamper, Howard B, Hahm, Joseph, Hou, Ya-Ming, O'Leary, Seán E, Wang, Yinsheng, Williams, Preston B   +9 more
core   +2 more sources

Cross-site comparison of ribosomal depletion kits for Illumina RNAseq library construction [PDF]

BMC Genomics, 2018
Background Ribosomal RNA (rRNA) comprises at least 90% of total RNA extracted from mammalian tissue or cell line samples. Informative transcriptional profiling using massively parallel sequencing technologies requires either enrichment of mature poly ...
Zachary T. Herbert, Jamie P. Kershner, Vincent L. Butty, Jyothi Thimmapuram, Sulbha Choudhari, Yuriy O. Alekseyev, Jun Fan, Jessica W. Podnar, Edward Wilcox, Jenny Gipson, Allison Gillaspy, Kristen Jepsen, Sandra Splinter BonDurant, Krystalynne Morris, Maura Berkeley, Ashley LeClerc, Stephen D. Simpson, Gary Sommerville, Leslie Grimmett, Marie Adams, Stuart S. Levine   +20 more
doaj   +3 more sources

Pre-Ribosomal RNA Processing in Human Cells: From Mechanisms to Congenital Diseases

Biomolecules, 2018
Ribosomal RNAs, the most abundant cellular RNA species, have evolved as the structural scaffold and the catalytic center of protein synthesis in every living organism.
Maxime Aubert, Marie-Françoise O’Donohue, Simon Lebaron, Pierre-Emmanuel Gleizes   +3 more
doaj   +2 more sources

Folding molecular origami from ribosomal RNA [PDF]

Journal of Nanobiotechnology
Approximately 80 percent of the total RNA in cells is ribosomal RNA (rRNA), making it an abundant and inexpensive natural source of long, single-stranded nucleic acid, which could be used as raw material for the fabrication of molecular origami.
Anastasia Shapiro, Noah Joseph, Nadav Mellul, Almogit Abu-Horowitz, Boaz Mizrahi, Ido Bachelet   +5 more
doaj   +2 more sources

Ribosomal RNA

Definitions, 2013
Kristine M. Molina, Kristine M. Molina, Heather Honoré Goltz, Marc A. Kowalkouski, Stacey L. Hart, David Latini, J. Rick Turner, J. Rick Turner, Leah Rosenberg, Sarah Piper, Leah Rosenberg, Sarah Piper, Timothy Wolf, Paul A. Estabrooks, Samantha M. Harden, Kacie C. Allen, Laura Rodriguez-Murillo, Rany M. Salem, J. Rick Turner, Jennifer Wessel, J. Rick Turner, Bengt H. Sjölund, M. Kathleen B. Lustyk, J. Rick Turner, Hiroe Kikuchi, Yori Gidron, Stephen Gallagher, Warren Tierney, Jennifer Wortmann, Login S. George, Crystal L. Park, Chad Barrett, Stephen Gallagher, Warren Tierney, Salvatore Insana, George J. Trachte, Ulrike Ehlert, Simona Fischbacher, J. Rick Turner, Marianne Shaughnessy, Bonnie Spring, Alex Pictor, Andrew DeMott, Molly Ferguson, Arlen C. Moller, Judith Carroll, Chris Dunkel Schetter, Susanne Fischer, Roland Thomeé, Randall Steven Jorgensen, Jane Monaco, Toshihide Hashimoto, Alexandra Martin, Bernt Lindahl, Catherine Darker, Tereza Killianova, Jana Strahler, Stephanie Ann Hooker, Yori Gidron   +58 more
semanticscholar   +3 more sources

Evidence for further non-coding RNA genes in the fungal rDNA region [PDF]

MycoKeys, 2022
Non-coding RNA (ncRNA) genes play important, but incompletely understood, roles in various cellular processes, notably translation and gene regulation.
Magnus Alm Rosenblad, Ellen Larsson, Arttapon Walker, Naritsada Thongklang, Christian Wurzbacher, R. Henrik Nilsson   +5 more
doaj   +3 more sources

Comprehensive identification of diverse ribosomal RNA modifications by targeted nanopore direct RNA sequencing and JACUSA2

RNA Biology, 2023
Ribosomal RNAs are decorated by numerous post-transcriptional modifications whose exact roles in ribosome biogenesis, function, and human pathophysiology remain largely unknown.
Isabel S. Naarmann-de Vries, Christiane Zorbas, Amina Lemsara, Michael Piechotta, Felix G. M. Ernst, Ludivine Wacheul, Denis L. J. Lafontaine, Christoph Dieterich   +7 more
doaj   +1 more source

A Ribosome Without RNA [PDF]

Frontiers in Ecology and Evolution, 2015
It was Francis Crick who first asked why the ribosome contains so much RNA, and discussed the implications of this for the direct flow of genetic information from DNA to protein. Remarkable advances in our understanding of the ribosome and protein synthesis, including the recent publication of two mammalian mitochondrial ribosome structures, have shed ...
Bernhardt, Harold S., Tate, Warren P.
openaire   +2 more sources

Complete mitochondrial genome of the recently discovered multivoltine Graphium (Pazala) confucius Hu, Duan & Cotton, 2018 (Lepidoptera: Papilionidae)

Mitochondrial DNA. Part B. Resources, 2022
Graphium (Pazala) confucius Hu, Duan & Cotton, 2018 is a recently discovered, wide ranging, multivoltine swordtail butterfly in China and Vietnam.
Fu-Rong He, Xin Zhang, Shao-Ji Hu
doaj   +1 more source