Results 21 to 30 of about 2,518,839 (195)

Specific biomarker mining and rapid detection of Burkholderia cepacia complex by recombinase polymerase amplification

open access: yesFrontiers in Microbiology, 2023
ObjectiveTo mine specific proteins and their protein-coding genes as suitable molecular biomarkers for the Burkholderia cepacia Complex (BCC) bacteria detection based on mega analysis of microbial proteomic and genomic data comparisons and to develop a ...
Yiling Fan   +10 more
doaj   +1 more source

Strain differentiation in ‘flavescence dorée’ phytoplasmas on SecY and Tuf genes.

open access: yes, 2012
Introduction A wide world severe spreading of ‘bois noir’ (BN) disease is recently reported in the majority of grapevine growing areas. Recent findings indicate that molecular variability inside the BN-associated stolbur phytoplasmas is present and for some genes such as elongation factor Tu (tuf gene) it could be related with epidemic features (Langer
PALTRINIERI, SAMANTA   +3 more
core   +3 more sources

Tapered optical fiber DNA biosensor for detecting Leptospira DNA

open access: yesAsian Pacific Journal of Tropical Medicine, 2023
Objective: To establish a DNA detection platform based on a tapered optical fiber to detect Leptospira DNA by targeting the leptospiral secY gene. Methods: The biosensor works on the principle of light propagating in the special geometry of the optical ...
Jia-Yong Lam   +2 more
doaj   +1 more source

SelenoDB 1.0 : a database of selenoprotein genes, proteins and SECIS elements [PDF]

open access: yesNucleic Acids Research, 2008
Selenoproteins are a diverse group of proteins usually misidentified and misannotated in sequence databases. The presence of an in-frame UGA (stop) codon in the coding sequence of selenoprotein genes precludes their identification and correct annotation.
Sergi Castellano   +3 more
openaire   +3 more sources

Core gene set as the basis of multilocus sequence analysis of the subclass Actinobacteridae. [PDF]

open access: yesPLoS ONE, 2011
Comparative genomic sequencing is shedding new light on bacterial identification, taxonomy and phylogeny. An in silico assessment of a core gene set necessary for cellular functioning was made to determine a consensus set of genes that would be useful ...
Toïdi Adékambi   +5 more
doaj   +1 more source

Phylogenetic analysis and delineation of phytoplasmas based on secY gene sequences [PDF]

open access: yesInternational Journal of Systematic and Evolutionary Microbiology, 2010
The secY gene sequence is more variable than that of the 16S rRNA gene. Comparative phylogenetic analyses with 16S rRNA and secY gene sequences from 80 and 83 phytoplasma strains, respectively, were performed to assess the efficacy of these sequences for delineating phytoplasma strains within each 16Sr group.
I-M, Lee   +4 more
openaire   +2 more sources

The function of SECIS RNA in translational control of gene expression in Escherichia coli [PDF]

open access: yesThe EMBO Journal, 2002
The incorporation of selenocysteine into proteins is directed by specific UGA codons and mRNA secondary structures, designated SECIS elements. In bacteria, these elements are positioned within the reading frame of selenoprotein mRNAs immediately downstream of the triplet coding for selenocysteine, and they tether a complex of the selenocysteine ...
Thanbichler, M. ; https://orcid.org/0000-0002-1303-1442   +1 more
openaire   +3 more sources

Detection and distribution of zoonotic pathogens in wild Norway rats (Rattus norvegicus) from Tehran, Iran

open access: yesNew Microbes and New Infections, 2021
This is the first study on the prevalence of vector-borne zoonotic pathogens found in Rattus norvegicus (R. norvegicus) in urban areas of Tehran, Iran. Serological tests were used to detect IgG antibodies against Coxiella burnetii (C.
T. Azimi   +5 more
doaj   +1 more source

Development and Validation of a New TaqMan Real-Time PCR for Detection of ‘Candidatus Phytoplasma pruni’

open access: yesPathogens, 2020
Phytoplasmas of the 16SrIII group are wide spread, and have a broad plant host range. Among these, ‘Candidatus phytoplasma pruni’ (‘Ca. P. pruni’; phytoplasmas of 16SrIII subgroup A) can cause serious diseases in Prunus species and ‘Ca. P. pruni’-related
Zala Kogej   +2 more
doaj   +1 more source

Molecular Characterization of Leptospira Species Detected in the Kidneys of Slaughtered Livestock in Abattoirs in Gauteng Province, South Africa

open access: yesPathogens, 2023
Leptospira was investigated in kidneys (n = 305) from slaughtered livestock in the Gauteng Province abattoirs, South Africa, using a culture medium to isolate Leptospira, followed by the LipL32 qPCR to detect Leptospira DNA.
Banenat B. Dogonyaro   +10 more
doaj   +1 more source

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