The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
Nucleic Acids Res., 2013 In 2004, the SEED (http://pubseed.theseed.org/) was created to provide consistent and accurate genome annotations across thousands of genomes and as a platform for discovering and developing de novo annotations.
R. Overbeek +13 more
semanticscholar +1 more source
Development of a Multiplex RT-PCR for the Simultaneous Detection of Five Viruses and Viroids in Peach [PDF]
Research in Plant DiseaseA multiplex reverse transcription-polymerase chain reaction (mRT-PCR) assay was developed for the simultaneous detection of three viruses and two viroids infecting peach trees, including apple chlorotic leaf spot virus, plum bark necrosis stem pitting ...
Jeong-Eun Kim +5 more
doaj +1 more source
Seed Health Testing: Doing Things Right
PhytoFrontiers, 2023 Since seeds can be a route for pathogen introduction, they are routinely inspected and tested to prevent pest outbreaks and introduction into new territories. The need for high throughput, short lead times, and cost reduction has played an important role
Gerrit A. Hiddink +3 more
doaj +1 more source
optimal conditions determination for standard germination test of Asafoetida (Ferula assa-foetida) seeds [PDF]
علوم و فناوری بذر ایران, 2023 Ferula assa-foetida is one of the important medicinal plants of Apiaceae that has been exposed to extinction with repeated withdrawals from its natural habitat. Study of seed germination behavior of this species can lead to the development of cultivation
Mohsen Malek +4 more
doaj +1 more source
The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote
Nucleic Acids Research, 2013 Read alignment is an ongoing challenge for the analysis of data from sequencing technologies. This article proposes an elegantly simple multi-seed strategy, called seed-and-vote, for mapping reads to a reference genome.
Yang Liao, G. Smyth, Wei Shi
semanticscholar +1 more source
The organic seed regulations framework in Europe – current status and recommendations for future development [PDF]
, 2012 Organic agriculture regulations, in particular European regulation EC 889/2008, prescribe the use of organically produced seed. For many cultivated plants, however, organic seed is often not available.
AM Osman +21 more
core +2 more sources
Influence of multiplicative stochastic variation on translational elongation rates. [PDF]
PLoS ONE, 2018 Experimental data indicate that stochastic effects exerted at the level of translation contribute substantially to the variation in abundance of proteins expressed at moderate to high levels.
Sandip Datta, Brian Seed
doaj +1 more source
Constructing a broadly inclusive seed plant phylogeny.
American-Eurasian journal of botany, 2018 PREMISE OF THE STUDY Large phylogenies can help shed light on macroevolutionary patterns that inform our understanding of fundamental processes that shape the tree of life.
Stephen A. Smith, Joseph W. Brown
semanticscholar +1 more source
Anthropogenic seed dispersal: rethinking the origins of plant domestication
, 2020 It is well documented that ancient sickle harvesting led to tough rachises, but the other seed dispersal properties in crop progenitors are rarely discussed. The first steps toward domestication are evolutionary responses for the recruitment of humans as
Spengler, R.
core +1 more source
Analysis of Seed Potato Systems in Ethiopia [PDF]
, 2010 This study aimed to analyze the seed potato systems in Ethiopia, identify constraints and prioritize improvement options, combining desk research, rapid appraisal and formal surveys, expert elicitation, field observations and local knowledge. In Ethiopia,
Hirpa, A. +6 more
core +1 more source