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Masked Minimizers: Unifying sequence sketching methods

open access: yesbioRxiv, 2022
AbstractMinimizers and syncmers are sequence sketching methods that extract representative substrings from a long sequence. We show that both these sampling rules are different instantiations of a new unifying concept we call masked minimizers, which applies a sub-sampling binary mask on a minimizer sketch.
Minh Hoang   +2 more
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An Algorithmic Approach for Sketching Sequence Diagram (AASSD)

Proceedings of the International Conference on Advances in Image Processing, 2017
Sequence diagram is used to illustrate the exchanging of information between users and system's components. Sequence diagram helps in leveling up the requirement description. The analyst is the role who is manually performing the developing of sequence diagram.
Heba A. Nassar   +2 more
openaire   +2 more sources

Interpreting urban space through cognitive map sketching and sequence analysis

Canadian Geographies / Géographies canadiennes, 2008
Traditionally, analysis of sketch maps of urban areas has focused on the interpretation of hand‐drawn renditions of features that are most familiar to individuals. Few researchers have investigated the sequence that sketchers use to identify features on the urban landscape and how these features are linked together to form a coherent ‘picture’ of an ...
NIEM TU HUYNH   +3 more
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Parallel Metagenomic Sequence Clustering Via Sketching and Maximal Quasi-clique Enumeration on Map-Reduce Clouds

2011 IEEE International Parallel & Distributed Processing Symposium, 2011
Taxonomic clustering of species is an important and frequently arising problem in metagenomics. High-throughput next generation sequencing is facilitating the creation of large metagenomic samples, while at the same time making the clustering problem harder due to the short sequence length supported and unknown species sampled.
Xiao Yang, Jaroslaw Zola, Srinivas Aluru
openaire   +2 more sources

Stroke Sequence in Digital Sketching

open access: yeseCAADe proceedings, 2004
What happens when a designer approaches a blank sheet of paper? Usually we can only see the finished work without knowing how it came together. By using the Logitech Io digital pen and its IoReader 1.01 „instant replay“ software (http: //www.logitechio ...
N. Cheng
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GMRES with randomized sketching and deflated restarting

SIAM Journal on Matrix Analysis and Applications, 2023
We present a new Krylov subspace recycling method for solving a linear system of equations, or a sequence of slowly changing linear systems. Our approach is to reduce the computational overhead of recycling techniques while still benefiting from the ...
Liam P Burke   +2 more
semanticscholar   +1 more source

Sketching methods with small window guarantee using minimum decycling sets

arXiv.org, 2023
Most sequence sketching methods work by selecting specific k-mers from sequences so that the similarity between two sequences can be estimated using only the sketches.
G. Marçais   +2 more
semanticscholar   +1 more source

SketchHealer: A Graph-to-Sequence Network for Recreating Partial Human Sketches

Proceedings of the British Machine Vision Conference 2020, 2020
To perceive and create a whole from parts is a prime trait of the human visual system. In this paper, we teach machines to perform a similar task by recreating a vectorised human sketch from its incomplete parts. This is fundamentally different to prior work on image completion (i) sketches exhibit a severe lack of visual cue and are of a sequential ...
Su, Guoyao   +4 more
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Doodle2App: Native App Code by Freehand UI Sketching

International Conference on Mobile Software Engineering and Systems, 2020
User interface development typically starts with freehand sketching, with pen on paper, which creates a big gap in the software development process.
Soumik Mohian, Christoph Csallner
semanticscholar   +1 more source

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