Results 21 to 30 of about 1,508,662 (316)

Genomic Insights of Multidrug-Resistant Escherichia coli From Wastewater Sources and Their Association With Clinical Pathogens in South Africa

Frontiers in Veterinary Science, 2021
There is limited information on the comparative genomic diversity of antibiotic-resistant Escherichia coli from wastewater. We sought to characterize environmental E.
Joshua Mbanga, Joshua Mbanga, Daniel G. Amoako, Daniel G. Amoako, Akebe L. K. Abia, Mushal Allam, Arshad Ismail, Sabiha Y. Essack   +7 more
doaj   +1 more source

Low Diversity Cryptococcus neoformans Variety grubii Multilocus Sequence Types from Thailand Are Consistent with an Ancestral African Origin [PDF]

, 2011
The global burden of HIV-associated cryptococcal meningitis is estimated at nearly one million cases per year, causing up to a third of all AIDS-related deaths.
Fisher, M.D., Annemarie E. Brouwer, Thomas S Harrison, Simwami, SP, Matthew C Fisher, Boekhout, T, Khayhan Kantarawee, Aanensen, D.M., Brouwer Annemarie E., Hagen, F, Daniel A Henk, Matthew C. Fisher, Harrison, T.S., Henk Daniel A., Donnelly Christl A., Harrison Thomas S., Fisher Matthew C., Khayhan, K., David M. Aanensen, Aanensen David M., Annemarie E Brouwer, Brouwer, A.E., Donnelly, C.A., Aanensen, DM, Christl A Donnelly, Henk, DA, Brouwer, AE, Hagen, F., Henk, D.A., Sitali P. Simwami, Sitali P Simwami, Khayhan, K, Donnelly, CA, Ferry Hagen, Daniel A. Henk, Fisher, MC, Christl A. Donnelly, Teun Boekhout, Hagen Ferry, Kantarawee Khayhan, Simwami Sitali P., Boekhout, T., Boekhout Teun, Harrison, TS, Thomas S. Harrison, Simwami, S.P., David M Aanensen   +46 more
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Draft Genome Sequence of an Escherichia coli O157:H43 Strain Isolated from Cattle [PDF]

, 2013
Here we report the draft genome sequence of an Escherichia coli O157:H43 strain, designated T22, with an atypical virulence gene profile and isolated from healthy cattle.
Maróti, Gergely, Szűcs, Attila, Sváb, Domonkos, Horváth, Balázs, Tóth, István   +4 more
core   +1 more source

Multilocus sequence types of invasive Corynebacterium diphtheriae isolated in the Rio de Janeiro urban area, Brazil [PDF]

, 2012
Invasive infections caused by Corynebacterium diphtheriae in vaccinated and non-vaccinated individuals have been reported increasingly. In this study we used multilocus sequence typing (MLST) to study genetic relationships between six invasive strains of
Miyoshi, A., Viguetti, S. Z., Mattos-Guaraldi, A. L., Dowson, Christopher G., Guiso, N., Pacheco, L. G. C., Bolt, F., Hirata, R., Azevedo, V., Rosso, M. L., Santos, L. S., Soares, S. C., Baldwin, Adam   +12 more
core   +1 more source

Genetic Diversity, Distribution, and Genomic Characterization of Antibiotic Resistance and Virulence of Clinical Pseudomonas aeruginosa Strains in Kenya

Frontiers in Microbiology, 2022
Pseudomonas aeruginosa is a leading cause of nosocomial infections worldwide. It can produce a range of debilitating infections, have a propensity for developing antimicrobial resistance, and present with a variety of potent virulence factors. This study
Shahiid Kiyaga, Cecilia Kyany'a, Cecilia Kyany'a, Angela W. Muraya, Hunter J. Smith, Emma G. Mills, Caleb Kibet, Gerald Mboowa, Gerald Mboowa, Lillian Musila, Lillian Musila   +10 more
doaj   +1 more source

Tidying up international nucleotide sequence databases [PDF]

, 2011
Sequence analysis of the ribosomal RNA operon, particularly the internal transcribed spacer (ITS) region, provides a powerful tool for identification of mycorrhizal fungi.
Schüssler, Arthur, Kohout, Petr, Jairus, Teele, Larsson, Karl-Henrik, Kõljalg, Urmas, Nilsson, R. Henrik, Grelet, Gwen-Aëlle, Ryberg, Martin, Veldre, Vilmar, Abarenkov, Kessy, Oja, Jane, Bonito, Gregory M., Tedersoo, Leho   +12 more
core   +1 more source

An assessment of feature relevance in predicting protein function from sequence [PDF]

, 2004
Improving the performance of protein function prediction is the ultimate goal for a bioinformatician working in functional genomics. The classical prediction approach is to employ pairwise sequence alignments. However this method often faces difficulties
Tan, AC, Al-Shahib, A, Tan, A.C., Gilbert, D, Gilbert, D.G., Aik Choon Tan, Chao He, Al-Shahib, Ali, Girolami, M, Mark Girolami, David Gilbert, Gilbert, M, ,, Girolami, M., He, C, Ali Al-shahib, He, C., Al-Shahib, A.   +17 more
core   +1 more source

The first case of detection of Listeria monocytogenes sequence types ST7, ST20, ST425 in wastewater during an investigation of water bodies in the Vologda region

Журнал микробиологии, эпидемиологии и иммунобиологии, 2022
Introduction. Listeria monocytogenes is an important human pathogen causing various forms of listeriosis, including foodborne infections, meningitis, neonatal sepsis, and abortion. Listeria are common all over the world.
Elena A. Alekseeva, Olga V. Polosenko, Nadezhda K. Fursova, Evgeny I. Astashkin, Valery N. Borzenkov, Angelina A. Kislichkina, Liubov V. Kolombet, Anatoly P. Shepelin, Andrey Yu. Mironov   +8 more
doaj   +1 more source

Characterizing Communication Channel Deadlocks in Sequence Diagrams [PDF]

, 2008
UML sequence diagrams (SDs) are a mainstay of requirements specifications for communication protocols. Mauw and Reniers' algebraic (MRA) semantics formally specifies a behaviour for these SDs that guarantees deadlock free processes.
Mitchell, Bill, B. Mitchell
core   +1 more source

Associations of the major international high-risk resistant clones and virulent clones with specific ompK36 allele groups in Klebsiella pneumoniae in Taiwan

New Microbes and New Infections, 2015
This study was conducted to investigate the association between ompK36 variants and international high-risk clones in Klebsiella pneumoniae. Fifty-nine sequence types (STs) divided into four ompK36 allele groups (groups A to D) were identified among 185 ...
J.J. Yan, M.C. Wang, P.X. Zheng, L.H. Tsai, J.J. Wu   +4 more
doaj   +1 more source