Results 1 to 10 of about 69,933 (343)

Population structure analysis of Salmonella serovar Muenchen to redefine geno-serotyping using genome indexing approaches [PDF]

Frontiers in Microbiology
Accurate identification of Salmonella serovars for source attribution in foodborne illness outbreaks. Traditional serotyping, which relies on antigenic properties, continues to serve as gold standard; however, advances in whole-genome sequencing (WGS ...
Padmini Ramachandran, Padmini Ramachandran, Kranti Konganti, Amanda M. Windsor, Christopher J. Grim, Abani K. Pradhan, Abani K. Pradhan   +6 more
doaj   +2 more sources

Accurate serotype identification of Streptococcus pneumoniae using nanopore Cas9-targeted serotype identification (nCATSerotyping) [PDF]

Journal of Clinical Microbiology
Streptococcus pneumoniae (pneumococcus) is a leading cause of community-acquired pneumonia and invasive diseases, particularly among children and the elderly.
Hyun Jung Ji, A-Yeung Jang, Seung Hyun Han, Min-Kyu Kim, Charles Euloge Lamien, Viskam Wijewardana, Ki Bum Ahn, Kyung-Hyo Kim, Joon Young Song, Ho Seong Seo   +9 more
doaj   +2 more sources

Salmonella’s lost phenotype: implications of sequence-based serotyping on the characterization of lipopolysaccharide-deficient Salmonella isolates [PDF]

Microbiology Spectrum
Salmonella serotyping is shifting from slide agglutination toward whole-genome sequencing (WGS). While WGS allows for comprehensive analyses, phenotypic information about lipopolysaccharide-deficient (“LPS-rough”) isolates obtained from slide ...
Jasmin Wenderlein, Andreas J. Stroehlein, Michael Pietsch, Sandra Simon, Istvan Szabo, Burkhard Malorny, Marina C. Lamparter, Jennie Fischer   +7 more
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Comparison of a PCR-based Salmonella serotyping kit with traditional serotyping methods

Zhongguo shipin weisheng zazhi, 2022
ObjectiveTo evaluate the efficacy of a polymerase chain reaction （PCR）-based rapid serotyping kit， compare it with traditional serological identification methods， and provide a more efficient and convenient method for serological identification of ...
DING Fenglan, LIU Jiangshan, ZHANG Xiaofang, QU Lianhai   +3 more
doaj   +1 more source

Molecular Detection of Non-O157 Shiga Toxin-Producing Escherichia coli (STEC) Directly from Stool Using Multiplex qPCR Assays

Microorganisms, 2022
Non-O157 Shiga toxin-producing E. coli (STEC) can cause outbreaks that have great economic and health impact. Since the implementation of STEC screening in Alberta in 2018, it is also essential to have a molecular serotyping method with faster turnaround
Michael Bording-Jorgensen, Brendon Parsons, Jonas Szelewicki, Colin Lloyd, Linda Chui   +4 more
doaj   +1 more source

Oxford nanopore technologies—a valuable tool to generate whole-genome sequencing data for in silico serotyping and the detection of genetic markers in Salmonella

Frontiers in Veterinary Science, 2023
Bacteria of the genus Salmonella pose a major risk to livestock, the food economy, and public health. Salmonella infections are one of the leading causes of food poisoning.
Christine Thomas, Christine Thomas, Ulrich Methner, Manja Marz, Jörg Linde   +4 more
doaj   +1 more source

Development and Evaluation of a Rapid Antigen Detection and Serotyping Lateral Flow Antigen Detection System for Foot-and-Mouth Disease Virus. [PDF]

PLoS ONE, 2015
We developed a lateral flow strip using monoclonal antibodies (MAbs) which allows for rapid antigen detection and serotyping of foot-and-mouth disease virus (FMDV). This FMDV serotyping strip was able to detect all 7 serotypes and distinguish serotypes O,
Kazuki Morioka, Katsuhiko Fukai, Kazuo Yoshida, Rie Kitano, Reiko Yamazoe, Manabu Yamada, Tatsuya Nishi, Toru Kanno   +7 more
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Development of a Molecular Serotyping Scheme for Morganella morganii

Frontiers in Microbiology, 2021
Morganella morganii, which is often regarded as a human commensal organism, can be an opportunistic pathogen, causing a variety of clinical infections with serious morbidity and mortality.
Bin Liu, Bin Liu, Xi Guo, Xi Guo, Jing Wang, Pan Wu, Shujie Li, Lu Feng, Lu Feng, Bin Liu, Bin Liu, Lei Wang, Lei Wang   +12 more
doaj   +1 more source

Monitoring the Microevolution of Salmonella enterica in Healthy Dairy Cattle Populations at the Individual Farm Level Using Whole-Genome Sequencing

Frontiers in Microbiology, 2021
Livestock represent a possible reservoir for facilitating the transmission of the zoonotic foodborne pathogen Salmonella enterica to humans; there is also concern that strains can acquire resistance to antimicrobials in the farm environment.
Laura M. Carroll, Ariel J. Buehler, Ahmed Gaballa, Julie D. Siler, Kevin J. Cummings, Rachel A. Cheng, Martin Wiedmann   +6 more
doaj   +1 more source

Serological and Molecular Survey for Dengue Virus Infection in Suspected Febrile Patients in Selected Local Government Areas in Adamawa State, Nigeria

Vaccines, 2022
Dengue is a disease caused by the dengue virus that is primarily transmitted by Aedes aegypti mosquitoes. Currently, the disease poses a threat to public health, with about 390 million people reported to be infected annually across the endemic regions of
Daniel Thakuma Tizhe, Jacob Kwada Paghi Kwaga, Grace Sabo Nok Kia   +2 more
doaj   +1 more source