Results 1 to 10 of about 106,975 (303)

Evaluating the Information Content of Shallow Shotgun Metagenomics

open access: yesMSystems, 2018
Although microbial communities are associated with human, environmental, plant, and animal health, there exists no cost-effective method for precisely characterizing species and genes in such communities.
Rob Knight, Qiyun Zhu, Daryl M Gohl
exaly   +5 more sources

Comprehensive Organ-Specific Profiling of Douglas Fir (Pseudotsuga menziesii) Proteome

open access: yesBiomolecules, 2023
The Douglas fir (Pseudotsuga menziesii) is a conifer native to North America that has become increasingly popular in plantations in France due to its many advantages as timber: rapid growth, quality wood, and good adaptation to climate change.
Caroline Teyssier   +5 more
doaj   +1 more source

Efficient and Quality-Optimized Metagenomic Pipeline Designed for Taxonomic Classification in Routine Microbiological Clinical Tests

open access: yesMicroorganisms, 2022
Metagenomics analysis is now routinely used for clinical diagnosis in several diseases, and we need confidence in interpreting metagenomics analysis of microbiota.
Sylvie Buffet-Bataillon   +6 more
doaj   +1 more source

Proteomic Shotgun and Targeted Mass Spectrometric Datasets of Cerebrospinal Fluid (Liquor) Derived from Patients with Vestibular Schwannoma

open access: yesData, 2023
Vestibular schwannomas are relatively rare intracranial tumors compared to other brain tumors. Data on the molecular features, especially on schwannoma proteome, are scarce.
Svetlana Novikova   +6 more
doaj   +1 more source

Evaluation of Host Depletion and Extraction Methods for Shotgun Metagenomic Analysis of Bovine Vaginal Samples

open access: yesMicrobiology Spectrum, 2022
The reproductive tract metagenome plays a significant role in the various reproductive system functions, including reproductive cycles, health, and fertility.
Chian Teng Ong   +6 more
doaj   +1 more source

Surgically Removed Intrapulmonary Shotgun Pellet without Traumatic Hemopneumothorax [PDF]

open access: yesJournal of Trauma and Injury, 2021
When treating firearms injuries, knowledge of the proper management is important because these injuries have high morbidity and mortality. However, due to strict gun safety regulations, surgeons in Asia often have limited experiences with gunshot wound ...
Soo Young Yoon, Young Hoon Sul
doaj   +1 more source

Unraveling the Microbiome of Necrotizing Enterocolitis: Insights in Novel Microbial and Metabolomic Biomarkers

open access: yesMicrobiology Spectrum, 2021
Necrotizing enterocolitis (NEC) is among the most relevant gastrointestinal diseases affecting mostly prematurely born infants with low birth weight. While intestinal dysbiosis has been proposed as one of the possible factors involved in NEC pathogenesis,
Chiara Tarracchini   +20 more
doaj   +1 more source

Age‐ and duration‐dependent effects of whey protein on high‐fat diet‐induced changes in body weight, lipid metabolism, and gut microbiota in mice

open access: yesPhysiological Reports, 2020
Bovine whey protein has been demonstrated to exert a positive effect on energy balance, lipid metabolism, and nutrient absorption. Additionally, it affects gut microbiota configuration.
Serena Boscaini   +6 more
doaj   +1 more source

Gut Bacteriomes and Ecological Niche Divergence: An Example of Two Cryptic Gastropod Species

open access: yesBiology, 2023
Symbiotic microorganisms may provide their hosts with abilities critical to their occupation of microhabitats. Gut (intestinal) bacterial communities aid animals to digest substrates that are either innutritious or toxic, as well as support their ...
Elizaveta Gafarova   +8 more
doaj   +1 more source

Coded Shotgun Sequencing [PDF]

open access: yesIEEE Journal on Selected Areas in Information Theory, 2022
Most DNA sequencing technologies are based on the shotgun paradigm: many short reads are obtained from random unknown locations in the DNA sequence. A fundamental question, studied in arXiv:1203.6233, is what read length and coverage depth (i.e., the total number of reads) are needed to guarantee reliable sequence reconstruction. Motivated by DNA-based
Aditya Narayan Ravi   +2 more
openaire   +3 more sources

Home - About - Disclaimer - Privacy