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Continuous Integration for Concurrent MOOSE Framework and Application Development on GitHub

Journal of Open Research Software, 2015
For the past several years, Idaho National Laboratory’s MOOSE framework team has employed modern software engineering techniques (continuous integration, joint application/framework source code repos- itories, automated regression testing, etc.) in ...
Andrew E. Slaughter, John W. Peterson, Derek R. Gaston, Cody J. Permann, David Andrš, Jason M. Miller   +5 more
doaj   +1 more source

Investigation of the fission gases behavior in meso scale: application in multiscale simulation of nuclear fuel [PDF]

مجله علوم و فنون هسته‌ای, 2022
The behavior of fission gases such as xenon and krypton have a significant effect on the performance of nuclear fuels, their active life,  and the length of the reactor operating cycle. Two important phenomena, including the release of fission gases from
M. Abbasi, M.H. Porhemmat, Y. Taghipour Azar, J. Karimi-Sabet   +3 more
doaj   +1 more source

CHARMM: The biomolecular simulation program

Journal of Computational Chemistry, 2009
CHARMM (Chemistry at HARvard Molecular Mechanics) is a highly versatile and widely used molecular simulation program. It has been developed over the last three decades with a primary focus on molecules of biological interest, including proteins, peptides,
B. Brooks, C. Brooks, A. MacKerell, L. Nilsson, R. Petrella, B. Roux, Y. Won, G. Archontis, C. Bartels, S. Boresch, A. Caflisch, L. Caves, Q. Cui, A. Dinner, M. Feig, Stefan Fischer, Jiali Gao, M. Hodošček, W. Im, K. Kuczera, T. Lazaridis, J. Ma, V. Ovchinnikov, E. Paci, R. Pastor, C. Post, J. Pu, M. Schaefer, B. Tidor, R. Venable, H. Woodcock, X. Wu, W. Yang, D. York, M. Karplus   +34 more
semanticscholar   +1 more source

Repercussions of the COVID-19 pandemic on the well-being and training of medical clerks: a pan-Canadian survey

BMC Medical Education, 2020
Background The COVID-19 pandemic has been an unprecedented and potentially stressful event that inserted itself into the 2019–2020 Canadian medical curriculum.
Myriam Abbas, Malek Dhane, Michèle Beniey, Léamarie Meloche-Dumas, Mohamed Eissa, Natasha Guérard-Poirier, Myriam El-Raheb, Florence Lebel-Guay, Adam Dubrowski, Erica Patocskai   +9 more
doaj   +1 more source

Biotite: new tools for a versatile Python bioinformatics library

BMC Bioinformatics, 2023
Background Biotite is a program library for sequence and structural bioinformatics written for the Python programming language. It implements widely used computational methods into a consistent and accessible package.
Patrick Kunzmann, Tom David Müller, Maximilian Greil, Jan Hendrik Krumbach, Jacob Marcel Anter, Daniel Bauer, Faisal Islam, Kay Hamacher   +7 more
doaj   +1 more source

The SIESTA method for ab initio order-N materials simulation [PDF]

, 2001
We have developed and implemented a selfconsistent density functional method using standard norm-conserving pseudopotentials and a flexible, numerical linear combination of atomic orbitals basis set, which includes multiple-zeta and polarization orbitals.
José M Soler, Emilio Artacho, Julian D Gale, Alberto García, Javier Junquera, Pablo Ordejón, Daniel Sánchez-Portal   +6 more
semanticscholar   +1 more source

Structured simulation-based education in emergency medicine residency programs: Pavia’s proposal for competence development and crisis management (Italy)

Emergency Care Journal
The growing complexity of Emergency Medicine (EM) - due to overcrowding, boarding, and the expanding social role of emergency departments - requires standardized and structured training models. Simulation in medicine is essential for education, training,
Bruno Barcella, Marco Bonzano, Stefano Perlini, Francesco Salinaro, Emergency Medicine Simulation Group   +4 more
doaj   +1 more source

An Adaptive Management Model for Brown Bears in Hokkaido: Based on Total Population and the Number of Nuisance Bears

Population Ecology, EarlyView.
Bear management changes management actions according to the horizontal axis of the population size and the vertical axis of the number of nuisance bears. Aiming for the target population size of Ntar, Actions I and II protect the bears, and Action IV reduces the population.
Hiroyuki Matsuda, Akira Maki, Tsutomu Mano, Hifumi Tsuruga, Hino Takafumi, Shinichi Horino   +5 more
wiley   +1 more source

The SIMCO containment code applied to modeling hydrogen distribution in containments of nuclear power facilities [PDF]

Nuclear Energy and Technology, 2018
The article gives a general description of the SIMCO calculation code designed to simulate thermohydraulic and physico-chemical processes in containments of nuclear power facilities.
Vyacheslav I. Dorovskikh, Sergey L. Dorokhovich, Aleksey A. Zajtsev, Valery A. Levchenko, Igor N. Leonov   +4 more
doaj   +3 more sources

DELPHES 3: a modular framework for fast simulation of a generic collider experiment [PDF]

Journal of High Energy Physics, 2013
The version 3.0 of the Delphes fast-simulation is presented. The goal of Delphes is to allow the simulation of a multipurpose detector for phenomenological studies.
J. Favereau, C. Delaere, P. Demin, A. Giammanco, V. Lemaitre, A. Mertens, M. Selvaggi, T. D. 3. collaboration   +7 more
semanticscholar   +1 more source