Results 31 to 40 of about 11,574,340 (406)

GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

Bioinform., 2013
MOTIVATION Molecular simulation has historically been a low-throughput technique, but faster computers and increasing amounts of genomic and structural data are changing this by enabling large-scale automated simulation of, for instance, many conformers ...
S. Pronk, Szilárd Páll, R. Schulz, Per Larsson, P. Bjelkmar, R. Apostolov, Michael R. Shirts, Jeremy C. Smith, P. Kasson, D. Spoel, B. Hess, E. Lindahl   +11 more
semanticscholar   +1 more source

Treatment planning with a 2.5 MV photon beam for radiation therapy

Journal of Applied Clinical Medical Physics, Volume 23, Issue 12, December 2022., 2022
Abstract Purpose The shallow depth of maximum dose and higher dose fall‐off gradient of a 2.5 MV beam along the central axis that is available for imaging on linear accelerators is investigated for treatment of shallow tumors and sparing the organs at risk (OARs) beyond it.
Navid Khaledi, Chris Hayes, Louise Belshaw, Mark Grattan, Rao Khan, James L. Gräfe   +5 more
wiley   +1 more source

Continuous Integration for Concurrent MOOSE Framework and Application Development on GitHub

Journal of Open Research Software, 2015
For the past several years, Idaho National Laboratory’s MOOSE framework team has employed modern software engineering techniques (continuous integration, joint application/framework source code repos- itories, automated regression testing, etc.) in ...
Andrew E. Slaughter, John W. Peterson, Derek R. Gaston, Cody J. Permann, David Andrš, Jason M. Miller   +5 more
doaj   +1 more source

Choose Your Simulator Wisely: A Review on Open-source Simulators for Autonomous Driving [PDF]

, 2023
Simulators play a crucial role in autonomous driving, offering significant time, cost, and labor savings. Over the past few years, the number of simulators for autonomous driving has grown substantially. However, there is a growing concern about the validity of algorithms developed and evaluated in simulators, indicating a need for a thorough analysis ...
arxiv   +1 more source

Discrete Choice Methods with Simulation

, 2016
Discrete Choice Methods with Simulation by Kenneth Train has been available in the second edition since 2009. The book is published by Cambridge University Press and is also available for download on the author’s homepage for private use.
Florian Heiss
semanticscholar   +1 more source

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation.

Journal of Chemical Theory and Computation, 2008
Molecular simulation is an extremely useful, but computationally very expensive tool for studies of chemical and biomolecular systems. Here, we present a new implementation of our molecular simulation toolkit GROMACS which now both achieves extremely ...
B. Hess, Carsten Kutzner, D. van der Spoel, E. Lindahl   +3 more
semanticscholar   +1 more source

The Cosmological simulation code GADGET-2 [PDF]

, 2005
We discuss the cosmological simulation code GADGET-2, a new massively parallel TreeSPH code, capable of following a collisionless fluid with the N-body method, and an ideal gas by means of smoothed particle hydrodynamics (SPH).
V. Springel
semanticscholar   +1 more source

Impact of flexible noise control (FNC) image processing parameters on portable chest radiography

Journal of Applied Clinical Medical Physics, Volume 23, Issue 12, December 2022., 2022
Abstract There is a lack of understanding in the performance of flexible noise control (FNC) processing, which is used in digital radiography on a scanner vendor and has four parameters each involving multiple options. The aim of this study was to investigate the impact of FNC on portable chest imaging. An anthropomorphic chest phantom was imaged using
Krystal M. Kirby, Liqiang Ren, Timothy R. Daly, Yasmeen K. Tandon, Brian J. Bartholmai, Beth A. Schueler, Zaiyang Long   +6 more
wiley   +1 more source

Volume staging for arteriovenous malformation SRS treatment using VMAT

Journal of Applied Clinical Medical Physics, Volume 23, Issue 12, December 2022., 2022
Abstract Volume staging involves dividing the target volume into smaller parts and treating each part separately. In this study, the feasibility of volume‐staged stereotactic radiosurgery (VS‐SRS) on a linear accelerator using volumetric modulated arc therapy (VMAT) and a frameless patient positioning system is investigated.
Claudia Mendez, Ermias Gete
wiley   +1 more source

Collinearity: a review of methods to deal with it and a simulation study evaluating their performance

, 2013
Collinearity refers to the non independence of predictor variables, usually in a regression-type analysis. It is a common feature of any descriptive ecological data set and can be a problem for parameter estimation because it inflates the variance of ...
C. Dormann, J. Elith, S. Bacher, C. M. Buchmann, G. Carl, Gabriel Carré, J. Márquez, B. Gruber, Bruno Lafourcade, P. Leitão, T. Münkemüller, C. McClean, P. Osborne, B. Reineking, B. Schröder, A. Skidmore, D. Zurell, S. Lautenbach   +17 more
semanticscholar   +1 more source