Results 91 to 100 of about 1,198,587 (324)

Diversification of molecularly defined myenteric neuron classes revealed by single cell RNA-sequencing

open access: yesbioRxiv, 2020
Autonomous regulation of the intestine requires the combined activity of functionally distinct neurons of the enteric nervous system (ENS). However, the variety of enteric neuron types and how they emerge during development remain largely unknown.
Khomgrit Morarach   +7 more
semanticscholar   +1 more source

Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information

open access: yesGenome Biology, 2022
Background Cell-cell interactions are important for information exchange between different cells, which are the fundamental basis of many biological processes.
Zhaoyang Liu, Dongqing Sun, Chenfei Wang
semanticscholar   +1 more source

Disordered but rhythmic—the role of intrinsic protein disorder in eukaryotic circadian timing

open access: yesFEBS Letters, EarlyView.
Unstructured domains known as intrinsically disordered regions (IDRs) are present in nearly every part of the eukaryotic core circadian oscillator. IDRs enable many diverse inter‐ and intramolecular interactions that support clock function. IDR conformations are highly tunable by post‐translational modifications and environmental conditions, which ...
Emery T. Usher, Jacqueline F. Pelham
wiley   +1 more source

Mesothelioma cell heterogeneity identified by single cell RNA sequencing

open access: yesScientific Reports
Mesothelioma cell heterogeneity encompasses diverse morphological and molecular characteristics observed within tumors, significantly impacting disease progression, treatment outcomes, and the development of targeted therapies.
Licun Wu   +4 more
doaj   +1 more source

Automatic cell type identification methods for single-cell RNA sequencing

open access: yesComputational and Structural Biotechnology Journal, 2021
Single-cell RNA sequencing (scRNA-seq) has become a powerful tool for scientists of many research disciplines due to its ability to elucidate the heterogeneous and complex cell-type compositions of different tissues and cell populations. Traditional cell-
Bingbing Xie   +3 more
doaj   +1 more source

A comparison of automatic cell identification methods for single-cell RNA sequencing data

open access: yesGenome Biology, 2019
Single-cell transcriptomics is rapidly advancing our understanding of the cellular composition of complex tissues and organisms. A major limitation in most analysis pipelines is the reliance on manual annotations to determine cell identities, which are ...
T. Abdelaal   +6 more
semanticscholar   +1 more source

Single-cell RNA sequencing reveals the effects of chemotherapy on human pancreatic adenocarcinoma and its tumor microenvironment

open access: yesbioRxiv, 2022
The role of therapy in shaping the tumor microenvironment in pancreatic ductal adenocarcinoma (PDAC) remains to be explored. Here, the authors perform single-cell RNA sequencing in PDAC samples before and after chemotherapy and suggest that chemotherapy ...
G. Werba   +20 more
semanticscholar   +1 more source

Virtual Environment for Next Generation Sequencing Analysis [PDF]

open access: yes, 2012
Next Generation Sequencing technology, on the one hand, allows a more accurate analysis, and, on the other hand, increases the amount of data to process.
Abate, Francesco   +4 more
core  

Protein pyrophosphorylation by inositol pyrophosphates — detection, function, and regulation

open access: yesFEBS Letters, EarlyView.
Protein pyrophosphorylation is an unusual signaling mechanism that was discovered two decades ago. It can be driven by inositol pyrophosphate messengers and influences various cellular processes. Herein, we summarize the research progress and challenges of this field, covering pathways found to be regulated by this posttranslational modification as ...
Sarah Lampe   +3 more
wiley   +1 more source

Single-cell RNA sequencing reveals functional heterogeneity of glioma-associated brain macrophages

open access: yesNature Communications, 2021
Microglia are resident myeloid cells in the central nervous system (CNS) that control homeostasis and protect CNS from damage and infections. Microglia and peripheral myeloid cells accumulate and adapt tumor supporting roles in human glioblastomas that ...
Natalia Ochocka   +7 more
semanticscholar   +1 more source

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