Results 41 to 50 of about 724,526 (380)

Picking single-nucleotide polymorphisms in forests [PDF]

open access: yesBMC Proceedings, 2007
Abstract With the development of high-throughput single-nucleotide polymorphism (SNP) technologies, the vast number of SNPs in smaller samples poses a challenge to the application of classical statistical procedures. A possible solution is to use a two-stage approach for case-control data in which, in the first stage, a screening test selects
Silke Szymczak   +3 more
openaire   +3 more sources

Single Nucleotide Polymorphism Markers Associated with Seed Quality Characteristics of Cultivated Lentil

open access: yesThe Plant Genome, 2018
Only a few genomic regions control seed shape in lentil. Single nucleotide polymorphism markers associated with seed dimensions were identified. Lentil seed size is not dependent on cotyledon color.
H. Khazaei   +4 more
semanticscholar   +1 more source

Inter-individual variation in nucleotide excision repair in young adults: effects of age, adiposity, micronutrient supplementation and genotype [PDF]

open access: yes, 2009
Nucleotide excision repair (NER) is responsible for repairing bulky helix-distorting DNA lesions and is essential for the maintenance of genomic integrity.
Alison Spiers   +11 more
core   +1 more source

MIG-seq: an effective PCR-based method for genome-wide single-nucleotide polymorphism genotyping using the next-generation sequencing platform

open access: yesScientific Reports, 2015
Restriction-enzyme (RE)-based next-generation sequencing methods have revolutionized marker-assisted genetic studies; however, the use of REs has limited their widespread adoption, especially in field samples with low-quality DNA and/or small quantities ...
Y. Suyama, Y. Matsuki
semanticscholar   +1 more source

Single nucleotide polymorphisms and cancer susceptibility [PDF]

open access: yesOncotarget, 2017
A large number of genes associated with various cancer types contain single nucleotide polymorphisms (SNPs). SNPs are located in gene promoters, exons, introns as well as 5'- and 3'- untranslated regions (UTRs) and affect gene expression by different mechanisms.
Heng Zhou, Na Deng, Hua Fan, Yuan Yuan
openaire   +3 more sources

Simultaneous profiling of transcriptome and DNA methylome from a single cell. [PDF]

open access: yes, 2016
BackgroundSingle-cell transcriptome and single-cell methylome technologies have become powerful tools to study RNA and DNA methylation profiles of single cells at a genome-wide scale. A major challenge has been to understand the direct correlation of DNA
An, Qin   +9 more
core   +3 more sources

p53 codon 72 polymorphism in Taiwanese breast cancer patients

open access: yesKaohsiung Journal of Medical Sciences, 2013
There are clear discrepancies between ethnicity and geographic area regarding the peak age incidence and mortality of breast cancer. Underlying variances include genetic, environmental, and socioeconomic factors.
Fang-Ming Chen   +4 more
doaj   +1 more source

Single Nucleotide Polymorphism Clustering in Systemic Autoimmune Diseases. [PDF]

open access: yesPLoS ONE, 2016
Systemic Autoimmune Diseases, a group of chronic inflammatory conditions, have variable symptoms and difficult diagnosis. In order to reclassify them based on genetic markers rather than clinical criteria, we performed clustering of Single Nucleotide ...
Thomas Charlon   +8 more
doaj   +1 more source

Gallium plasmonic nanoparticles for label-free DNA and single nucleotide polymorphism sensing.

open access: yesNanoscale, 2016
A label-free DNA and single nucleotide polymorphism (SNP) sensing method is described. It is based on the use of the pseudodielectric function of gallium plasmonic nanoparticles (GaNPs) deposited on Si (100) substrates under reversal of the polarization ...
A. Marín   +7 more
semanticscholar   +1 more source

Strong association of interleukin-6 −174G/C promoter single nucleotide polymorphism with a decreased risk of colorectal cancer in ethnic Kashmiri population: A case control study

open access: yesTumor Biology, 2017
Chronic inflammation increases the risk of development of various cancers, including colorectal cancer. Interleukin-6 has been described as a key regulator of colorectal cancer development and is important in the process of colorectal tumorigenesis ...
Mujeeb Zafar Banday   +4 more
doaj   +1 more source

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