Results 121 to 130 of about 1,566,477 (261)

Construction and evaluation of a high-density SNP array for the Pacific oyster (Crassostrea gigas)

PLoS ONE, 2017
Single nucleotide polymorphisms (SNPs) are widely used in genetics and genomics research. The Pacific oyster (Crassostrea gigas) is an economically and ecologically important marine bivalve, and it possesses one of the highest levels of genomic DNA ...
Haigang Qi, Kai Song, Chunyan Li, Wei Wang, Busu Li, Li Li, Guofan Zhang   +6 more
semanticscholar   +1 more source

Development of a 690 K SNP array in catfish and its application for genetic mapping and validation of the reference genome sequence

Scientific Reports, 2017
Single nucleotide polymorphisms (SNPs) are capable of providing the highest level of genome coverage for genomic and genetic analysis because of their abundance and relatively even distribution in the genome.
Qifan Zeng, Qiang Fu, Yun Li, G. Waldbieser, B. Bosworth, Shikai Liu, Yujia Yang, Lisui Bao, Zihao Yuan, Ning Li, Zhanjiang Liu   +10 more
semanticscholar   +1 more source

Development and Application of High‐Density Axiom Cajanus SNP Array with 56K SNPs to Understand the Genome Architecture of Released Cultivars and Founder Genotypes

The Plant Genome, 2018
Axiom Cajanus SNP array revealed genetic architecture and temporal diversity in pigeonpea varieties.
R. Saxena, A. Rathore, A. Bohra, P. Yadav, R. Das, Aamir W. Khan, V. K. Singh, A. Chitikineni, I. Singh, C. S. Kumar, K. Saxena, R. Varshney   +11 more
semanticscholar   +1 more source

EnsembleCNV: an ensemble machine learning algorithm to identify and genotype copy number variation using SNP array data

bioRxiv, 2018
The associations between diseases/traits and copy number variants (CNVs) have not been systematically investigated in genome-wide association studies (GWASs), primarily due to a lack of robust and accurate tools for CNV genotyping.
Zhongyang Zhang, Haoxiang Cheng, X. Hong, A. D. Narzo, Oscar Franzén, Shouneng Peng, A. Ruusalepp, J. Kovacic, J. Bjorkegren, Xiaobin Wang, K. Hao   +10 more
semanticscholar   +1 more source

Robust remapping of equine SNP array coordinates to EquCab3.

Animal Genetics, 2018
Three commercial SNP genotyping arrays have been made available for the horse to date: Illumina Equine SNP50, 1 SNP70 BeadChips (SNP50 and SNP70) and the Thermo-Fischer (formerly Affymetrix) Axiom® MNEc670k array (MNEc670k), designed for imputation to ...
S. K. Beeson, R. Schaefer, Victor C. Mason, M. McCue   +3 more
semanticscholar   +1 more source

Rare Copy Number Variants in \u3cem\u3eNRXN1\u3c/em\u3e and \u3cem\u3eCNTN6\u3c/em\u3e Increase Risk for Tourette Syndrome [PDF]

, 2017
Tourette syndrome (TS) is a model neuropsychiatric disorder thought to arise from abnormal development and/or maintenance of cortico-striato-thalamo-cortical circuits.
Aschauer, Harald, Barr, Cathy L., Barta, Csaba, Batterson, James R., Berlin, Cheston, Budman, Cathy L., Cath, Danielle C., Chen, Jason A., Coppola, Giovanni, Cox, Nancy J., Davis, Lea K., Depienne, Christel, Dion, Yves, Freimer, Nelson B., Grados, Marco, Hartmenn, Andreas, Hebebrand, Johannes, Huang, Alden Y., Illmann, Cornelia, King, Robert A., Knowles, James A., Konstantinidis, Anastasios, Lyon, Gholson J., Malaty, Irene A., Mathews, Carol A., McGrath, Lauren M., McMahon, William M., Müller-Vahl, Kirsten R., Nagy, Peter, Neale, Benjamin M., Nöthen, Marcus M., Okun, Michael S., Osiecki, Lisa, Paschou, Peristera, Pato, Carlos N., Pato, Michele T., Pauls, David L., Posthuma, Danielle, Ramensky, Vasily, Ramos, Eliana Marisa, Rees, Elliott, Rizzo, Renata, Rouleau, Guy, Sandor, Paul, Scharf, Jeremiah M., Schloegelhofer, Monika, Singer, Harvey S., Stamenkovic, Mara, Stuhrmann, Manfred, Sul, Jae Hoon, Tarnok, Zsanett, Tsetsos, Fotis, Wolanczyk, Tomasz, Woods, Douglas W., Worbe, Yulia, Yu, Dongmei, Zelaya, Ivette   +56 more
core   +1 more source

Parallel Genotyping of Human SNPs Using Generic High-density Oligonucleotide Tag Arrays [PDF]

, 2000
Jian-Bing Fan, Xiaoqiong Chen, Marc K. Halushka, Anthony Berno, Xiaohua Huang, Thomas B. Ryder, Robert J. Lipshutz, David J. Lockhart, Aravinda Chakravarti   +8 more
openalex   +1 more source

SNP array-based analyses of unbalanced embryos as a reference to distinguish between balanced translocation carrier and normal blastocysts

Journal of Assisted Reproduction and Genetics, 2016
PurposeThe purpose of the study is to validate a method that provides the opportunity to distinguish a balanced translocation carrier embryo from a truly normal embryo in parallel with comprehensive chromosome screening (CCS).MethodsA series of ...
N. Treff, K. Thompson, M. Rafizadeh, Michael Chow, L. Morrison, X. Tao, H. Garnsey, C. V. Reda, T. L. Metzgar, S. Neal, C. Jalas, R. Scott, E. Forman   +12 more
semanticscholar   +1 more source

High-Throughput SNP Genotyping by SBE/SBH

, 2005
Despite much progress over the past decade, current Single Nucleotide Polymorphism (SNP) genotyping technologies still offer an insufficient degree of multiplexing when required to handle user-selected sets of SNPs.
Mandoiu, Ion I., Prajescu, Claudia
core   +2 more sources

Development and application of a novel genome-wide SNP array reveals domestication history in soybean

Scientific Reports, 2016
Domestication of soybeans occurred under the intense human-directed selections aimed at developing high-yielding lines. Tracing the domestication history and identifying the genes underlying soybean domestication require further exploration.
Jiao Wang, Shanshan Chu, Huairen Zhang, Ying Zhu, Hao Cheng, Deyue Yu   +5 more
semanticscholar   +1 more source