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Understanding Software Evolution Using a Combination of Software Visualization and Software Metrics [PDF]

open access: yes, 2002
Coping with huge amounts of data is one of the major problems in the context of software evolution. Current approaches reduce this complexity by filtering out irrelevant information. In this paper we propose an approach based on a combination of software
Ducasse, Stéphane, Lanza, Michele
core   +2 more sources

Translophagy—A potential link between autophagy impairment and translational errors

open access: yesFEBS Letters, EarlyView.
Neurodegenerative diseases are characterised by the accumulation of abnormal proteins and protein aggregates, but their origin often remains unknown. We propose that selective autophagy removes damaged protein‐making machinery, preventing errors during protein synthesis.
Mykola V. Korolchuk   +11 more
wiley   +1 more source

AutoSpearman: Automatically Mitigating Correlated Software Metrics for Interpreting Defect Models

open access: yes, 2018
The following topics are dealt with: software maintenance; public domain software; software engineering; program debugging; program testing; Java; mobile computing; application program interfaces; pattern classification; Android (operating system ...
Christoph Treude   +8 more
core   +1 more source

Structural and biochemical analysis of a B12 superbinder

open access: yesFEBS Letters, EarlyView.
BtuG proteins are vitamin B12 scavengers in Bacteroides thetaiotaomicron, a dominant human gut bacterium. We present crystal structures of three BtuG homologs bound to cobalamin and its precursor cobinamide, revealing picomolar binding affinities, among the highest known for any natural protein.
Jose M. Martinez Felices   +3 more
wiley   +1 more source

System Evolution, Feedback and Compliant Architectures [PDF]

open access: yes, 2011
Proceedings, International Workshop on Feedback and Evolution in Software and Business Processes (FEAST 2000), Imperial College, London.
Mayes, K   +6 more
core   +2 more sources

The Shewanella oneidensis Fic enzyme SoFic targets the switch‐I region of EF‐Tu for AMPylation

open access: yesFEBS Letters, EarlyView.
Fic enzymes mediate diverse post‐translational modifications across all domains of life, including AMPylation. Prokaryotic EF‐Tu can be AMPylated and deAMPylated by the conserved Fic enzyme SoFic. Structural and biochemical approaches were used to characterize the effect of AMPylation on EF‐Tu, SoFic's enzymatic activities, and the enzyme‐target ...
Svenja Runge   +6 more
wiley   +1 more source

Microservices Evolution Factors: A Multivocal Literature Review

open access: yesIEEE Access
Microservices is a software architectural approach based on decomposing systems into small services that are simpler and technology-independent for their development and operation.
Sebastian Pinto-Aguero, Rene Noel
doaj   +1 more source

EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data

open access: yesBMC Bioinformatics, 2019
Background High throughput sequence data has provided in depth means of molecular characterization of populations. When recorded at numerous time steps, such data can reveal the evolutionary dynamics of the population under study by tracking the changes ...
Chandler D. Gatenbee   +3 more
doaj   +1 more source

Software System Evolution Analysis Method Based on Algebraic Topology

open access: yesTsinghua Science and Technology, 2018
The analysis of software system evolution is highly significant in software research as the evolution runs throughout the lifecycle of a software system.
Chun Shan   +4 more
doaj   +1 more source

L‐aspartate oxidase provides new insights into fumarate reduction in anaerobic darkness in Synechocystis sp. PCC6803

open access: yesFEBS Letters, EarlyView.
Synechocystis strains deficient in succinate dehydrogenase (SDH) secrete more succinate than the WT under dark anaerobic conditions, supporting that SDH then primarily acts as SDH, not as a fumarate reductase. L‐aspartate oxidase (Laspo) from Synechocystis is functional under anaerobic conditions, reducing fumarate to succinate.
Kateryna Kukil   +3 more
wiley   +1 more source

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