Results 21 to 30 of about 153,560 (299)

Chromatin Compaction Multiscale Modeling: A Complex Synergy Between Theory, Simulation, and Experiment

open access: yesFrontiers in Molecular Biosciences, 2020
Understanding the mechanisms that trigger chromatin compaction, its patterns, and the factors they depend on, is a fundamental and still open question in Biology.
Artemi Bendandi   +6 more
doaj   +1 more source

Molecular Recognition and Self-Organization in Life Phenomena Studied by a Statistical Mechanics of Molecular Liquids, the RISM/3D-RISM Theory

open access: yesMolecules, 2021
There are two molecular processes that are essential for living bodies to maintain their life: the molecular recognition, and the self-organization or self-assembly.
Masatake Sugita   +4 more
doaj   +1 more source

Octanol/water distribution coefficients of the C~1~ through C~7~ perfluoro-n-alkyl sulfonates: Comparison of the IEFPCM-UFF, CPCM, and SMD solvation models [PDF]

open access: yes, 2010
The octanol/water distribution coefficients (log D~ow~) of the C~1~ through C~7~ perfluoro-n-alkyl sulfonates (PFSAs) were calculated using the M062X/6-311++G(d,p) and MP2/6-311++G(d,p)//M062X/6-311++G(d,p) levels of theory and the IEFPCM-UFF, CPCM, and ...
Kaya Forest, Sierra Rayne
core   +2 more sources

Gradient models in molecular biophysics: progress, challenges, opportunities

open access: yesJournal of the Mechanical Behavior of Materials, 2013
In the interest of developing a bridge between researchers modeling materials and those modeling biological molecules, we survey recent progress in developing nonlocal-dielectric continuum models for studying the behavior of proteins and nucleic acids ...
Bardhan Jaydeep P.
doaj   +1 more source

Solvation and Aggregation of Meta-Aminobenzoic Acid in Water: Density Functional Theory and Molecular Dynamics Study

open access: yesPharmaceutics, 2018
Meta-aminobenzoic acid, an important model system in the study of polymorphism and crystallization of active pharmaceutical ingredients, exist in water in both the nonionic (mABA) and zwitterionic (mABA±) forms.
Etienne Gaines, Devis Di Tommaso
doaj   +1 more source

Kamlet–Taft Solvation Parameters of Solvate Ionic Liquids

open access: yesChemPhysChem, 2016
AbstractThe Kamlet–Taft solvent parameters of solvate ionic liquids (SILs) prepared from lithium salts with glyme and glycol ligands are determined. The dipolarity/polarisibilities (π*) are high, similar to those found in conventional ionic liquids. The H‐bond basicities (β) depend strongly on the anion.
Dr Andrew Dolan   +3 more
openaire   +4 more sources

Aqueous titanium redox flow batteries—State-of-the-art and future potential

open access: yesFrontiers in Energy Research, 2022
Market-driven deployment of inexpensive (but intermittent) renewable energy sources, such as wind and solar, in the electric power grid necessitates grid-stabilization through energy storage systems Redox flow batteries (RFBs), with their rated power and
Sheikh Imran Uddin Ahmed   +5 more
doaj   +1 more source

1/f spectrum and memory function analysis of solvation dynamics in a room-temperature ionic liquid

open access: yes, 2008
To understand the non-exponential relaxation associated with solvation dynamics in the ionic liquid 1-ethyl-3-methylimidazolium hexafluorophosphate, we study power spectra of the fluctuating Franck-Condon energy gap of a diatomic probe solute via ...
Daun Jeong   +9 more
core   +1 more source

Influence of the solvent on the stability of bis(terpyridine) structures on graphite

open access: yesBeilstein Journal of Nanotechnology, 2013
The effect of solvation on the adsorption of organic molecules on graphite at room temperature has been addressed with force-field molecular dynamics simulations.
Daniela Künzel, Axel Groß
doaj   +1 more source

The Inclusion of Water Molecules in Residue Interaction Networks Identifies Additional Central Residues

open access: yesFrontiers in Molecular Biosciences, 2018
The relevance of water molecules for the recognition and the interaction of biomolecules is widely appreciated. In this paper we address the role that water molecules associated to protein complexes play for the functional relevance of residues by ...
Guillaume Brysbaert   +2 more
doaj   +1 more source

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