Results 11 to 20 of about 200,238 (297)

Confidence-based somatic mutation evaluation and prioritization. [PDF]

open access: yesPLoS Computational Biology, 2012
Next generation sequencing (NGS) has enabled high throughput discovery of somatic mutations. Detection depends on experimental design, lab platforms, parameters and analysis algorithms.
Martin Löwer   +12 more
doaj   +4 more sources

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples [PDF]

open access: yes, 2020
The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) curated consensus somatic mutation calls using whole exome sequencing (WES) and whole genome sequencing (WGS), respectively.
PCAWG novel somatic mutation calling methods working group   +2 more
core   +3 more sources

Association analysis using somatic mutations. [PDF]

open access: yesPLoS Genetics, 2018
Somatic mutations drive the growth of tumor cells and are pivotal biomarkers for many cancer treatments. Genetic association analysis using somatic mutations is an effective approach to study the functional impact of somatic mutations.
Yang Liu, Qianchuan He, Wei Sun
doaj   +1 more source

Somatic Mutations in Cardiovascular Disease [PDF]

open access: yesCirculation Research, 2022
Advances in population-scale genomic sequencing have greatly expanded the understanding of the inherited basis of cardiovascular disease (CVD). Reanalysis of these genomic datasets identified an unexpected risk factor for CVD, somatically acquired DNA mutations. In this review, we provide an overview of somatic mutations and their contributions to CVD.
J. Brett Heimlich, Alexander G. Bick
openaire   +2 more sources

Three distinct hematological malignancies from a single germ cell tumor: a case report

open access: yesJournal of Medical Case Reports, 2020
Background The association between non seminomatous germ cell tumors (GCTs) and hematological malignancies of rare lineage has been described in the literature.
M. Spencer Chapman   +3 more
doaj   +1 more source

Mutational signatures are jointly shaped by DNA damage and repair

open access: yesNature Communications, 2020
Recent research has shown that mutational signatures reflective of the history of a cancer can be detected in a cancer genome. Here, using whole genome sequencing of DNA repair deficient and proficient nematodes exposed to genotoxins, the authors show ...
Nadezda V. Volkova   +10 more
doaj   +1 more source

CDKN2A deletion is a frequent event associated with poor outcome in patients with peripheral T-cell lymphoma not otherwise specified (PTCL-NOS)

open access: yesHaematologica, 2020
Nodal peripheral T-cell lymphoma not otherwise specified (PTCLNOS) remains a diagnosis encompassing a heterogenous group of PTCL cases not fitting criteria for more homogeneous subtypes.
Francesco Maura   +18 more
doaj   +1 more source

Whole-genome sequencing reveals progressive versus stable myeloma precursor conditions as two distinct entities

open access: yesNature Communications, 2021
The factors that are associated with myeloma precursor condition progression are not well understood. Here the authors find that monoclonal gammopathies of undetermined significance and smoldering myelomas that did not progress to multiple myelomas have ...
Bénedith Oben   +26 more
doaj   +1 more source

Identification of novel germline mutations in hereditary colorectal cancer patients and characterization of somatic alterations in their tumors [PDF]

open access: yes, 2008
Colorectal cancer has been reported as the third leading cause of cancer related death in the world. About 5-10% of colorectal cancers are due to an inherited predisposition.
Zhang, Jian
core   +1 more source

The VH gene repertoire of splenic B cells and somatic hypermutation in systemic lupus erythematosus [PDF]

open access: yes, 2003
In systemic lupus erythematosus (SLE) it has been hypothesized that self-reactive B cells arise from virgin B cells that express low-affinity, nonpathogenic germline V genes that are cross-reactive for self and microbial antigens, which convert to high ...
Stott, DI   +11 more
core   +1 more source

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