Results 111 to 120 of about 14,465 (182)

Efficient Construction and Utilization of k-Ordered FM-indexes with kISS for Ultra-Fast Read Mapping in Large Genomes. [PDF]

Bioinformatics
Yang ZD, Kuo HY, Hsieh PW, Hung JH.
europepmc   +1 more source

Computing Suffix Links for Suffix Trees and Arrays

, 2005
We present a new and simple algorithm to reconstruct suffix links in suffix trees and suffix arrays. The algorithm is based on observations regarding suffix tree construction algorithms. With our algorithm we bring suffix arrays even closer to the ease of use and implementation of suffix trees.
openaire   +1 more source

The FORGENIUS Genomic Resources: New Genotyping Tools and Genomic Data for 23 Forest Tree Species and Their Genetic Conservation Units. [PDF]

Mol Ecol Resour
Pinosio S, Bagnoli F, Avanzi C, Castellani MB, Frascella A, McEvoy SL, Olsson S, Spanu I, Vajana E, FORGENIUS Consortium, González-Martínez SC, Pyhäjärvi T, Scotti I, Vendramin GG, Piotti A.   +14 more
europepmc   +1 more source

A Benchmark for Virus Infection Reporter Virtual Staining in Fluorescence and Brightfield Microscopy. [PDF]

Sci Data
Wyrzykowska M, Della Maggiora G, Deshpande N, Mokarian A, Yakimovich A.   +4 more
europepmc   +1 more source

What are the benefits of directed attention within verbal working memory? [PDF]

Q J Exp Psychol (Hove)
Jeanneret S, Vergauwe E, Hautekiet C, Langerock N.   +3 more
europepmc   +1 more source

Panaln: indexing pangenome for read alignment. [PDF]

Bioinformatics
Guo L, He Z, Huo H.
europepmc   +1 more source

Secure Compressed Suffix Arrays

This paper proposes a secure compressed suffix array, which is a data oblivious and compressed version of the suffix array used for finding substrings of a large string. Secure compressed suffix arrays can be used for indexing a large collection of strings containing personal information such as DNA data.
openaire   +1 more source

MRS-BIDS, an extension to the Brain Imaging Data Structure for magnetic resonance spectroscopy. [PDF]

Sci Data
Bouchard AE, Wong D, Bogner W, Gau R, Halchenko YO, Lamb DG, Markiewicz CJ, Mullins PG, Niso G, Oeltzschner G, BIDS Maintainers, Clarke WT, Wilson M, Mikkelsen M.   +13 more
europepmc   +1 more source

Effective primer design for genotype and subtype detection of highly divergent viruses in large scale genome datasets. [PDF]

BMC Bioinformatics
Demiralay B, Can T.
europepmc   +1 more source

PLA-index: A <i>k</i>-mer Index Exploiting Rank Curve Linearity. [PDF]

Algorithms Bioinform
Abrar H, Medvedev P.
europepmc   +1 more source