Spatial Omics in Clinical Research: A Comprehensive Review of Technologies and Guidelines for Applications. [PDF]
Lee Y, Lee M, Shin Y, Kim K, Kim T.
europepmc +1 more source
Enhanced Activities of OCT4 and SOX2 Promote Epigenetic Reprogramming by Shortening G1 Phase
Fusing the VP16 domain to OCT4 and SOX2 (OvSvK) enhances iPSC generation by activating downstream targets, including those regulating the cell cycle. This accelerates reprogramming by shortening the G1 phase and reducing H3K27me3 levels. Modulating Ccnd1, Cdkn2a, and Ccne1 improves efficiency, linking cell cycle to epigenetic remodeling.
Lin Guo+17 more
wiley +1 more source
Spatial transcriptomics in autoimmune rheumatic disease: potential clinical applications and perspectives. [PDF]
Miyamoto AT+3 more
europepmc +1 more source
The study reveals that glutaminolysis in macrophages is inhibited under type 2 diabetes mellitus (T2DM) conditions, which impedes fracture healing by reducing bone morphogenetic protein 2 (BMP2) production through increased cytosine methylation on the promoter.
Jing Wang+12 more
wiley +1 more source
Apoptotic Bodies Restore NAD and Mitochondrial Homeostasis in Fibroblasts
Mesenchymal stem cell‐derived apoptotic bodies (MSC‐ABs) target keloid fibroblasts (KFs), restoring nicotinamide adenine dinucleotide (NAD) metabolism and mitochondrial function, suppressing collagen overproduction, and rebalancing tissue homeostasis, offering a novel therapy for keloid.
Shutong Qian+10 more
wiley +1 more source
Correction: Xie et al. Exploring the Mechanisms and Preventive Strategies for the Progression from Idiopathic Pulmonary Fibrosis to Lung Cancer: Insights from Transcriptomics and Genetic Factors. <i>Biomedicines</i> 2024, <i>12</i>, 2382. [PDF]
Xie K+7 more
europepmc +1 more source
MP3 tumor cells, a specific subpopulation of tumor cells in D‐TGCT, regulated the differentiation of CD34+ Fbs into MMP3+ Fbs and APOE+ Fbs through COL6A3 − (ITGAV + ITGB8) interaction. APOE+ Fbs activated IL‐1B+CCL20+ Mφs through the CXCL12/CXCR4 axis. IL‐1B+CCL20+ Mφs and MMP3+ Fbs participated in the local invasion of D‐TGCT.
Yubin Xie+15 more
wiley +1 more source
Integrating -Omic Technologies across Modality, Space, and Time to Decipher Remodeling in Cardiac Disease. [PDF]
Mulvey JF+3 more
europepmc +1 more source
Unveiling Multi‐Scale Architectural Features in Single‐Cell Hi‐C Data Using scCAFE
scCAFE is a deep learning framework designed to identify multi‐scale 3D genome architectural features from single‐cell Hi‐C data without dense imputation. It predicts chromatin loops, TAD‐like domains, and A/B compartments, enabling efficient characterization of organization at the single‐cell level. scCAFE also identifies marker loop anchors, offering
Fuzhou Wang+12 more
wiley +1 more source
Advancing omics technologies in acute respiratory distress syndrome: paving the way for personalized medicine. [PDF]
Al-Husinat L+12 more
europepmc +1 more source