Results 41 to 50 of about 3,587,142 (311)

Optical mapping as a routine tool for bacterial genome sequence finishing [PDF]

, 2007
Background: In sequencing the genomes of two Xenorhabdus species, we encountered a large number of sequence repeats and assembly anomalies that stalled finishing efforts.
Norton, S., Miller, N., Zijin Du, Goldman, Barry S., Latreille Phil, Bode, Helge Björn, Henkhaus John, Forst, Steve, John Henkhaus, Goodrich-Blair, H., Miller, Nancy, Slater Steven, Stacie Norton, Bode, H., Goldman Barry S, Henkhaus, J., Gaudriault, S., Steve Forst, Creg Darby, Gaudriault Sophie, Darby Creg, Goldman, B., Gaudriault, Sophie, Darby, C., Du, Z., Goodner, B., Norton, Stacie, Sophie Gaudriault, Miller Nancy, Goodrich-Blair, Heidi, Henkhaus, John, Heidi Goodrich-Blair, Gaudriault, Sophie, S., Latreille, Phil, Slater, S., Goodrich-Blair Heidi, Goodner, Brad, Goodner Brad, Latreille, P., Bode, Helge B., Nancy Miller, Norton Stacie, Brad Barbazuk, Phil Latreille, Steven Slater, Slater, Steven, Forst Steve, Helge B Bode, Forst, S., Barbazuk, Brad, Barbazuk Brad, Du, Zijin, Bode Helge B, Barry S Goldman, Du Zijin, Brad Goodner, Barbazuk, B., Darby, Creg   +57 more
core   +1 more source

From Capillary Electrophoresis to Deep Sequencing: An Improved HIV-1 Drug Resistance Assessment Solution Using In Vitro Diagnostic (IVD) Assays and Software

Viruses, 2023
Background: Drug-resistance mutations were mostly detected using capillary electrophoresis sequencing, which does not detect minor variants with a frequency below 20%.
Sofiane Mohamed, Ronan Boulmé, Chalom Sayada   +2 more
doaj   +1 more source

Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome [PDF]

, 2009
Background Although the Illumina 1 G Genome Analyzer generates billions of base pairs of sequence data, challenges arise in sequence selection due to the varying sequence quality.
Kerstens Hindrik HD, Heuven, H.C.M., Johan T den Dunnen, Henri CM Heuven, Andreia J Amaral, den Dunnen Johan T, Dibbits Bert, Groenen Martien AM, Heuven Henri CM, Megens, H.J.W.C., Amaral Andreia J, Megens Hendrik-Jan, Bert Dibbits, Martien AM Groenen, Groenen, M.A.M., Hendrik-Jan Megens, Dibbits, B.W., Dungen, J., den, Kerstens, H.H.D., Hindrik HD Kerstens, Richard PMA Crooijmans, Crooijmans, R.P.M.A., den Dungen, J., Crooijmans Richard PMA, Amaral, A.J.   +24 more
core   +1 more source

Genomic Characteristics and Functional Analysis of Brucella sp. Strain WY7 Isolated from Antarctic Krill

Microorganisms, 2023
Antarctic krill (Euphausia superba) is a key species of the Antarctic ecosystem whose unique ecological status and great development potential have attracted extensive attention.
Zhengqi Feng, Yuanyuan Wang, Lingbo Ma, Shanzi Huang, Lumin Wang, Jianguo He, Changjun Guo   +6 more
doaj   +1 more source

Genomic Characterization of a Wild-Type Bovine alphaherpesvirus 1 (BoAHV-1) Strain Isolated in an Outbreak in Central Italy

Viruses
Bovine alphaherpesvirus-1 (BoAHV-1) infection is common in cattle worldwide. However, information on the spread of BoAHV-1-circulating strains in Italy remains limited.
Stefano Petrini, Valentina Curini, Cecilia Righi, Cesare Cammà, Valeria Di Lollo, Elena Tinelli, Luana Fiorella Mincarelli, Elisabetta Rossi, Giulia Costantino, Barbara Secondini, Silvia Pirani, Monica Giammarioli, Francesco Feliziani   +12 more
doaj   +1 more source

Salmonella Serotyping Using Whole Genome Sequencing

Frontiers in Microbiology, 2018
Until recently, traditional serology and the Kauffmann White Scheme (KWS) have been the gold standard for Salmonella serotyping. Whole Genome Sequencing (WGS) has now emerged as an alternative in this field.
George M. Ibrahim, Paul M. Morin
doaj   +1 more source

Isolation, Identification, and Whole Genome Analysis of Chicken Infectious Anemia Virus in an Outbreak of Disease in Adult Layer Hens

Veterinary Sciences, 2023
Chicken infectious anemia (CIA) poses a significant threat to the chicken industry in China. Due to its non-specific symptoms, the disease is often overlooked.
Yueyan Zeng, Hui Zhang, Huanrong Zhang
doaj   +1 more source

Ovarian Sex Cord Stromal Tumors in Children and Adolescents—The European Standard Clinical Practice Recommendations

Pediatric Blood &Cancer, EarlyView.
ABSTRACT As part of the European Cooperative Study Group for Paediatric Rare Tumours initiative, we developed standard clinical practice guidelines for ovarian sex cord stromal tumors, based on comprehensive national and international cohort analyses, literature review, and a final expert consensus conference.
Dominik T. Schneider, Kris‐Ann Schultz, Nora Schnitzler, Michael Abele, Tal Ben‐Ami, Ewa Bien, Gianni Bisogno, Ines B. Brecht, Maja Cesen, Andrea Ferrari, Michaela Kuhlen, Malgorzata A. Krawczyk, Ricardo Lopez‐Almaraz, Yves Reguerre, Calogero Virgone, Daniel Orbach   +15 more
wiley   +1 more source

The South Asian Genome [PDF]

, 2014
The genetic sequence variation of people from the Indian subcontinent who comprise one-quarter of the world's population, is not well described. We carried out whole genome sequencing of 168 South Asians, along with whole-exome sequencing of 147 South ...
Li Yingrui, Afaq, S, Elliott Paul, Aitman, Timothy J., Scott, WR, Jun Wang (5906), Vandrovcova, Jana, Gaulton, KJ, McCarthy, Mark I, Gaulton Kyle J., Northwood Korrinne, Turro, Ernest, Frank Geoghegan, Sehmi Joban, Elliott, Paul, Frank Geoghegan (614027), Saima Afaq (614013), Afzal, Uzma, Scott, William R, Chambers John C., Northwood, K, Jun Wang, Jagvir Grewal, Grewal Jagvir, Kooner, Jaspal, Alexandra M Lewin, Afzal, U, Jaspal S. Kooner (163553), Butcher, S, Al-hussaini, Abtehale, Mills Rebecca, Wang, J, Afaq, Saima, Chambers, John, Lewin, Alexandra M, Chambers, John C, Vandrovcova Jana, Zhang, W, Korrinne Northwood (614026), Rebecca Mills (614022), Gaulton, Kyle J., Gurpreet S. Wander (163534), Laticia Oozageer (614019), James Abbott, Timothy J Aitman, Mark I. McCarthy (145748), Oozageer, L, Uzma Afzal, Sarah Butcher, Yingrui Li (149030), Joban Sehmi (245407), Kooner, IK, Mccarthy, Mark I., Sehmi, Joban, Al-Hussaini Abtehale, Weihua Zhang, Kooner Jaspal S., Loh, Marie, Lavery Anita, Saima Afaq, Jana Vandrovcova, William R Scott, Vasileios Panoulas, Grewal, Jagvir, Wass, MN, Alexandra M. Lewin (614025), Turro Ernest, Chambers, JC, Lavery, A, James Scott (40922), Uzma Afzal (614012), Turro, E, Lewin, AM, Grewal, J, McCarthy, MI, Weihua Zhang (44940), Ernest Turro (85076), McCarthy Mark I., Scott, James, Lehne, B, Sian-Tsung Tan, Jaspal S Kooner, Afaq Saima, Tan Sian-Tsung, Jana Vandrovcova (90909), Wang Jun, Laticia Oozageer, Pearson, Richard D, Richard D. Pearson (614015), Wander Gurpreet S., Gurpreet S Wander, Tan, ST, Abtehale Al-Hussaini (614021), Marie Loh, Ishminder K. Kooner (614020), Wang, Jun, Butcher, Sarah, Pearson, RD, Ishminder K Kooner, Abbott, J, Kyle J. Gaulton (277252), Kooner Ishminder K., Benjamin Lehne (215790), Li, Y, Aitman, TJ, Li, X, Anita Lavery, Lavery, Anita, Lewin Alexandra M., Abbott, James, William R. Scott (391938), Pearson Richard D., Vasileios Panoulas (614024), Kooner, Jaspal S, Jagvir Grewal (614023), Oozageer, Laticia, Lewin, Alexandra M., Miller Kathryn, Xinzhong Li, Aitman Timothy J., Sarah Butcher (204203), Northwood, Korrinne, Miller, Kathryn, Wass, Mark N, Lehne Benjamin, Scott, J, Abbott, James; id_orcid, Lehne, Benjamin, Kathryn Miller (614018), Sian-Tsung Tan (614011), Kooner, Ishminder K, James Abbott (614010), Panoulas Vasileios, Li Xinzhong, Richard D Pearson, Kyle J Gaulton, Elliott, P, Geoghegan Frank, Paul Elliott, Panoulas, Vasileios, Wander, Gurpreet S, Al-Hussaini, A, O'Reilly, P, Aitman, Timothy J, Li, Yingrui, James Scott, Kooner, Jaspal S., Abbott James, Wass Mark N., Kooner, JS, Vandrovcova, J, Marie Loh (6467), O'reilly, Paul, Oozageer Laticia, Chambers, John C., Ernest Turro, Panoulas, V, Wass, Mark N., Zhang Weihua, Yingrui Li, Scott, William R., Scott William R., Loh Marie, O'Reilly Paul, Korrinne Northwood, Rebecca Mills, John C Chambers, Tan, Sian-tsung, Zhang, Weihua, Paul O'Reilly (614014), Butcher Sarah, Sehmi, J, Paul O'Reilly, Mark N. Wass (614017), Li, Xinzhong, Mark I McCarthy, Mills, Rebecca, Tan, S-T, Paul Elliott (27295), Afzal Uzma, Benjamin Lehne, Wander, Gurpreet S., Abtehale Al-Hussaini, Mills, R, Zhi, Degui, Timothy J. Aitman (250706), Wander, GS, Pearson, Richard D., Loh, M, John C. Chambers (163544), Anita Lavery (614016), Scott James, Geoghegan, F, Mark N Wass, Gaulton, Kyle J, Miller, K, Xinzhong Li (430872), Kathryn Miller, Kooner, Ishminder K., Geoghegan, Frank, Joban Sehmi   +200 more
core   +1 more source

Evidence of Circulation and Phylogenetic Analysis of Hepatitis E Virus (HEV) in Wild Boar in South-East Italy

Viruses, 2023
Hepatitis E virus (HEV) is an important cause of acute viral hepatitis in humans worldwide. The food-borne transmission of HEV appears to be a major route in Europe through the consumption of pork and wild boar meat.
Gianfranco La Bella, Maria Grazia Basanisi, Gaia Nobili, Rosa Coppola, Annita Maria Damato, Adelia Donatiello, Gilda Occhiochiuso, Antonella Cristina Romano, Mariateresa Toce, Lucia Palazzo, Francesco Pellegrini, Angela Fanelli, Barbara Di Martino, Elisabetta Suffredini, Gianvito Lanave, Vito Martella, Giovanna La Salandra   +16 more
doaj   +1 more source