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Reply to: ‘Subfunctionalization versus neofunctionalization after whole-genome duplication’
Nature Genetics, 2018Reply to: 'Subfunctionalization versus neofunctionalization after whole-genome duplication'.
Braasch, Ingo +3 more
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Whole-Genome Duplication and Yeast’s Fruitful Way of Life
Trends in Genetics, 2019Studies on the fate of Saccharomyces cerevisiae paralogous gene pairs that arose through a whole-genome duplication event have shown diversification of retained duplicated genes. Paralogous functional specialization often results in improved function and/or novel function that could contribute to the adaptation of the organism to a new lifestyle. Here,
Ximena, Escalera-Fanjul +3 more
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Whole Genome Duplication in Plants: Implications for Evolutionary Analysis
2017The recurrent cycle of whole genome duplication (WGD) followed by massive duplicate gene loss (fractionation) differentiates plant evolutionary history from that of most other phylogenetic domains, where WGD has occurred relatively rarely, even on an evolutionary time scale. We discuss the mechanism of WGD and its biological consequences. We survey the
David, Sankoff, Chunfang, Zheng
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Whole-Genome Duplications in Pear and Apple
2019Whole-genome duplications (WGDs) are widespread in angiosperms, and are proposed to have contributed to angiosperm diversification. Pear (Pyrus) and apple (Malus) belong to the large and diverse Maleae tribe, and their genome sequences have extensive syntenic blocks covering much of the chromosomes, thus providing strong support for WGDs.
Hao Li, Chien-Hsun Huang, Hong Ma
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Descendants of Whole Genome Duplication within Gene Order Phylogeny
Journal of Computational Biology, 2008Genome doubling simultaneously doubles all genetic markers. Genome rearrangement phylogenetics requires that all genomes analyzed have the same set of orthologs, so that it is not possible to include doubled and unduplicated genomes in the same phylogeny.
Chunfang, Zheng +2 more
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Whole Genome Duplication of Intra- and Inter-chromosomes in the Tomato Genome
Journal of Genetics and Genomics, 2012Whole genome duplication (WGD) events have been proven to occur in the evolutionary history of most angiosperms. Tomato is considered a model species of the Solanaceae family. In this study, we describe the details of the evolutionary process of the tomato genome by detecting collinearity blocks and dating the WGD events on the tree of life by ...
Chi, Song +3 more
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Novel teleost whole-genome sequences for studying genome evolution after whole genome duplication
2019Novel teleost whole-genome sequences for studying genome evolution after whole genome duplication.
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