Results 121 to 130 of about 1,170,509 (350)

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome [PDF]

, 2015
Citation: Chapman, J. A., Mascher, M., Buluç, A., Barry, K., Georganas, E., Session, A., . . . Rokhsar, D. S. (2015). A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome. Genome Biology, 16(1). doi:10.1186/s13059-
A Graner, A Kovach, A Zimin, Adam Session, AR Hastie, AR Quinlan, Aydın Buluç, B Nystedt, C Alkan, C Feuillet, C Feuillet, C Saintenac, CR Cavanagh, CW Nossa, D Arend, Daniel S Rokhsar, E Paux, EK Khlestkina, EP Wilhelm, Evangelos Georganas, EW Myers, F Choulet, G Zhang, Gary J Muehlbauer, H Li, H Li, HQ Ling, I Birol, International Barley Genome Sequencing Consortium, International Rice Genome Sequencing P, International Wheat Genome Sequencing Consortium, J Dolezel, J Jia, J Jurka, J Oeveren van, JA Chapman, JA Poland, Jarrod A Chapman, JC Venter, Jeremy Schmutz, Jerry Jenkins, Jesse A Poland, JJ Smith, JL Weber, K Arumuganathan, K Devos, K Mochida, Katherine A Yelick, KD Pruitt, Kerrie Barry, KR Bradnam, KS Caldwell, L Ramsay, Leonid Oliker, LG Neves, LJ Williams, M Mascher, M Mascher, M Mascher, M Mascher, M Muñoz-Amatriaín, M-C Luo, Martin Mascher, ME Sorrells, MJ Truco, MW Hahn, N Poursarebani, Nils Stein, P Green, PS Schnable, R Brenchley, R Flavell, Robbie Waugh, SF Altschul, SF Altschul, Sunish Sehgal, T Belova, The Mouse Genome Sequencing Consortium, Uwe Scholz, Veronika Strnadova, X Wang, X Xu, Y Wu, Z Zhang   +83 more
core   +5 more sources

Whole genome sequencing of canids reveals genomic regions under selection and variants influencing morphology

Nature Communications, 2019
Domestic dog breeds are characterized by an unrivaled diversity of morphologic traits and breed-associated behaviors resulting from human selective pressures.
J. Plassais, Jaemin Kim, B. Davis, D. Karyadi, A. Hogan, Alex C. Harris, B. Decker, H. Parker, E. Ostrander   +8 more
semanticscholar   +1 more source

Inhibition of CDK9 enhances AML cell death induced by combined venetoclax and azacitidine

Molecular Oncology, EarlyView.
The CDK9 inhibitor AZD4573 downregulates c‐MYC and MCL‐1 to induce death of cytarabine (AraC)‐resistant AML cells. This enhances VEN + AZA‐induced cell death significantly more than any combination of two of the three drugs in AraC‐resistant AML cells.
Shuangshuang Wu, Jianlei Zhao, Aaban Asfar Azmi, Avanti Gupte, Jenna Thibodeau, Shuang Liu, Jinli Yang, Guan Wang, Holly Edwards, Lisa A. Polin, Juiwanna Kushner, Sijana H. Dzinic, Kathryn White, Julie Boerner, Maik Hüttemann, Jay Yang, Yue Wang, Jeffrey W. Taub, Yubin Ge   +18 more
wiley   +1 more source

Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

Data in Brief, 2018
This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug ...
Jayshree Advani, Kusum Sharma, Renu Verma, Oishi Chatterjee, Hitendra S. Solanki, Aman Sharma, Subhash Varma, Manish Modi, Pallab Ray, Megha Sharma, M.S. Dhillion, Akhilesh Pandey, Harsha Gowda, T.S. Keshava Prasad   +13 more
doaj   +1 more source

Author Correction: Estimation of the mutation rate of Mycobacterium tuberculosis in cases with recurrent tuberculosis using whole genome sequencing [PDF]

, 2023
Jéssica Comín, Alberto Cebollada, María José Iglesias, Daniel Ibarz, Jesús Viñuelas, Luis Torres Carretero, Juan Sahagún, María Carmen Lafoz, Felipe Esteban Juanas, María Carmen Malo, Sofía Samper   +10 more
openalex   +1 more source

Characterizing epithelial‐mesenchymal transition‐linked heterogeneity in breast cancer circulating tumor cells at a single‐cell level

Molecular Oncology, EarlyView.
In over 50% of non‐metastatic breast cancer patients, circulating tumor cells (CTCs) along the whole epithelial‐mesenchymal transition spectrum are detected. Total CTC number and individual phenotypes relate to aggressive disease characteristics, including lymph node involvement and higher tumor proliferation. At the single‐cell level, mesenchymal CTCs
Justyna Topa, Julia Richert, Tomasz Stokowy, Alicja Staśczak, Mariusz Szajewski, Maciej Ciesielski, Petra M. Grešner, Bartłomiej Tomasik, Łukasz Arcimowicz, Agnieszka Stankiewicz, Grażyna Suchodolska, Elżbieta Senkus, Wiesław Kruszewski, Anna J. Żaczek, Aleksandra Markiewicz   +14 more
wiley   +1 more source

FinaleMe: Predicting DNA methylation by the fragmentation patterns of plasma cell-free DNA

Nature Communications
Analysis of DNA methylation in cell-free DNA reveals clinically relevant biomarkers but requires specialized protocols such as whole-genome bisulfite sequencing.
Yaping Liu, Sarah C. Reed, Christopher Lo, Atish D. Choudhury, Heather A. Parsons, Daniel G. Stover, Gavin Ha, Gregory Gydush, Justin Rhoades, Denisse Rotem, Samuel Freeman, David W. Katz, Ravi Bandaru, Haizi Zheng, Hailu Fu, Viktor A. Adalsteinsson, Manolis Kellis   +16 more
doaj   +1 more source

Whole-Transcriptome Sequencing-Based Analysis of DAZL and Its Interacting Genes during Germ Cells Specification and Zygotic Genome Activation in Chickens [PDF]

, 2020
Deivendran Rengaraj, Sohyoung Won, Jong Won Han, DongAhn Yoo, Heebal Kim, Jae Yong Han   +5 more
openalex   +1 more source

Benchmarking of Nanopore R10.4 and R9.4.1 flow cells in single-cell whole-genome amplification and whole-genome shotgun sequencing.

Computational and Structural Biotechnology Journal, 2023
Y. Ni, Xudong Liu, Zemenu Mengistie Simeneh, Mengsu Yang, Runsheng Li   +4 more
semanticscholar   +1 more source

Whole-genome-sequencing of triple negative breast cancers in a population-based clinical study

Nature Network Boston, 2019
Whole-genome sequencing (WGS) brings comprehensive insights to cancer genome interpretation. To explore the clinical value of WGS, we sequenced 254 triple-negative breast cancers (TNBCs) for which associated treatment and outcome data were collected ...
J. Staaf, D. Głodzik, A. Bosch, J. Vallon-Christersson, C. Reuterswärd, J. Häkkinen, A. Degasperi, T. Amarante, L. Saal, C. Hegardt, Hilary Stobart, A. Ehinger, C. Larsson, L. Rydén, N. Loman, M. Malmberg, A. Kvist, H. Ehrencrona, Helen R Davies, Å. Borg, S. Nik-Zainal   +20 more
semanticscholar   +1 more source