Results 51 to 60 of about 1,158,172 (358)

DOE JGI Metagenome Workflow

mSystems, 2021
The DOE JGI Metagenome Workflow is designed for processing metagenomic data sets starting from Illumina fastq files. It performs data preprocessing, error correction, assembly, structural and functional annotation, and binning.
Alicia Clum, Marcel Huntemann, Brian Bushnell, Brian Foster, Bryce Foster, S. Roux, Patrick Hajek, N. Varghese, Supratim Mukherjee, T. Reddy, C. Daum, Y. Yoshinaga, R. O'Malley, Rekha Seshadri, N. Kyrpides, Emily Eloe-Fadrosh, I. Chen, A. Copeland, Natalia N. Ivanova   +18 more
semanticscholar   +1 more source

Sentinel-1 GRD Preprocessing Workflow

Proceedings, 2019
The Copernicus Programme has become the world’s largest space data provider, providing complete, free and open access to satellite data, mainly acquired by Sentinel satellites.
F. Filipponi
semanticscholar   +1 more source

Prediction of higher-selectivity catalysts by computer-driven workflow and machine learning

Science, 2019
Predicting catalyst selectivity Asymmetric catalysis is widely used in chemical research and manufacturing to access just one of two possible mirror-image products.
Andrew F. Zahrt, J. Henle, Brennan T. Rose, Yang Wang, William T. Darrow, S. Denmark   +5 more
semanticscholar   +1 more source

A complete data processing workflow for CryoET and subtomogram averaging [PDF]

Nature Methods, 2019
Electron cryotomography is currently the only method capable of visualizing cells in three dimensions at nanometer resolutions. While modern instruments produce massive amounts of tomography data containing extremely rich structural information, data ...
Muyuan Chen, James M. Bell, Xiaodong Shi, Stella Y. Sun, Zhao Wang, S. Ludtke   +5 more
semanticscholar   +1 more source

Bioconductor Workflow for Microbiome Data Analysis: from raw reads to community analyses

F1000Research, 2016
High-throughput sequencing of PCR-amplified taxonomic markers (like the 16S rRNA gene) has enabled a new level of analysis of complex bacterial communities known as microbiomes. Many tools exist to quantify and compare abundance levels or OTU composition
B. Callahan, Kris Sankaran, Julia Fukuyama, Paul J. McMurdie, S. Holmes   +4 more
semanticscholar   +1 more source

A fully automated high-throughput workflow for 3D-based chemical screening in human midbrain organoids

eLife, 2020
Three-dimensional (3D) culture systems have fueled hopes to bring about the next generation of more physiologically relevant high-throughput screens (HTS).
Henrik Renner, Martha Grabos, Katharina Becker, Theresa Kagermeier, Jie Wu, Mandy Otto, S. Peischard, D. Zeuschner, Y. Tsytsyura, Paul Disse, J. Klingauf, Sebastian A. Leidel, G. Seebohm, H. Schöler, J. Bruder   +14 more
semanticscholar   +1 more source

RT‐PCR–Based Detection of Bone Marrow Involvement in Ewing Sarcoma: Diagnostic Validity and Prognostic Relevance

Pediatric Blood &Cancer, EarlyView.
ABSTRACT Background In Ewing sarcoma (EwS), metastases, including those to bone marrow (BM), are the main factors influencing prognosis. Although reverse transcription polymerase chain reaction (RT‐PCR) offers greater sensitivity, the current EWING protocol defines BM metastases solely using light microscopic detection.
Thanh Pham, Andreas Ranft, Victor Rechl, Susanne Jabar, Wolfgang Hartmann, Kim Falkenberg, Heribert Jürgens, Norbert Graf, Torsten Keßler, Markus Metzler, Thomas Klingebiel, Thorsten Simon, Martin Benesch, Uta Dirksen   +13 more
wiley   +1 more source

The MedSupport Multilevel Intervention to Enhance Support for Pediatric Medication Adherence: Development and Feasibility Testing

Pediatric Blood &Cancer, EarlyView.
ABSTRACT Introduction We developed MedSupport, a multilevel medication adherence intervention designed to address root barriers to medication adherence. This study sought to explore the feasibility and acceptability of the MedSupport intervention strategies to support a future full‐scale randomized controlled trial.
Elizabeth G. Bouchard, Hital Patel, Paula C. Vincent, Justine Kahn, Kira Bona, Thai Hoa Tran, Elisa M. Rodriguez, Kristopher Attwood, Kara M. Kelly   +8 more
wiley   +1 more source

Cerebrospinal Fluid Liquid Biopsy Enables Targeted Therapy Without Tissue Diagnosis in Pediatric Low‐Grade Gliomas With BRAF V600E Mutation

Pediatric Blood &Cancer, EarlyView.
ABSTRACT We present two pediatric cases of pediatric low‐grade gliomas (PLGG) with BRAF V600E mutations diagnosed and monitored using cerebrospinal fluid (CSF) liquid biopsy analyzed via digital droplet PCR (ddPCR), without tissue biopsy. Both patients were treated with dabrafenib and trametinib and monitored through clinical assessments, magnetic ...
Hannah Sultan, Damien Faury, Alexander G. Weil, Harrison J. Westwick, Nada Jabado, Sébastien Perreault   +5 more
wiley   +1 more source

Some aspects of computed tomography in Russia

South African Journal of Radiology, 2009
None
S V Jargin, E E Jargin
doaj   +1 more source