Results 11 to 20 of about 40,833 (276)

Codominant scoring of AFLP in association panels [PDF]

Theoretical and Applied Genetics, 2010
A study on the codominant scoring of AFLP markers in association panels without prior knowledge on genotype probabilities is described. Bands are scored codominantly by fitting normal mixture models to band intensities, illustrating and optimizing existing methodology, which employs the EM-algorithm.
Gort, G., van Eeuwijk, F.A.
openaire   +4 more sources

AFLP-AFLP in silico-NGS approach reveals polymorphisms in repetitive elements in the malignant genome

PLOS ONE, 2018
The increasing interest in exploring the human genome and identifying genetic risk factors contributing to the susceptibility to and outcome of diseases has supported the rapid development of genome-wide techniques. However, the large amount of obtained data requires extensive bioinformatics analysis.
Jitka Koblihova, Klara Srutova, Monika Krutska, Hana Klamova, Katerina Machova Polakova   +4 more
openaire   +5 more sources

AFLP technology for DNA fingerprinting

Nature Protocols, 2007
The AFLP technique is a powerful DNA fingerprinting technology applicable to any organism without the need for prior sequence knowledge. The protocol involves the selective PCR amplification of restriction fragments of a total digest of genomic DNA, typically obtained with a mix of two restriction enzymes.
Marnik, Vuylsteke, Johan D, Peleman, Michiel J T, van Eijk   +2 more
openaire   +3 more sources

AFLP: a new technique for DNA fingerprinting.

Nucleic Acids Research, 1995
(Uploaded by Plazi for the Bat Literature Project) A novel DNA fingerprinting technique called AFLP is described. The AFLP technique is based on the selective PCR amplification of restriction fragments from a total digest of genomic DNA. The technique involves three steps: (i) restriction of the DNA and ligation of oligonucleotide adapters, (ii ...
P. Vos, R. Hogers, M. Bleeker, M. Reijans, Theodore Lee, Miranda Hornes, A. Friters, J. Pot, J. Paleman, M. Kuiper, M. Zabeau   +10 more
semanticscholar   +5 more sources

Ecological Epigenetics: Beyond MS-AFLP. [PDF]

Integrative and Comparative Biology, 2013
Ecological Epigenetics studies the relationship between epigenetic variation and ecologically relevant phenotypic variation. As molecular epigenetic mechanisms often control gene expression, even across generations, they may impact many evolutionary processes.
A. Schrey, Mariano Alvarez, C. Foust, Holly J. Kilvitis, Jacob D. Lee, A. Liebl, Lynn B. Martin, C. Richards, Marta Robertson   +8 more
semanticscholar   +4 more sources

AFLPinSilico, simulating AFLP fingerprints [PDF]

Bioinformatics, 2003
Abstract Summary: A drawback of the Amplified Fragment Length Polymorphism (AFLP) fingerprinting method is the difficulty to correlate the different fragments with their DNA sequence. The AFLPinSilico application presented here simulates AFLP experiments run on either cDNA or genomic sequences, producing virtual fingerprints that allow ...
Stephane Rombauts, Yves Van de Peer, Pierre Rouzé   +2 more
openaire   +2 more sources

AFLP-based mRNA fingerprinting [PDF]

Nucleic Acids Research, 1996
AFLP, a robust and rapid technique for displaying large numbers of DNA polymorphisms, is being used extensively for genetic mapping and fingerprinting in plants (1). Use of this technique avoids problems which may be encountered with reproducibility and optimisation of reaction conditions when using arbitrarily primed PCR.
Tracy Money, Steve Reader, Li Jia Qu, Roy P. Dunford, Graham Moore   +4 more
openaire   +2 more sources

Differentiation of European cattle by AFLP fingerprinting [PDF]

Animal Genetics, 2007
SummaryThe Neolithic introduction of domestic cattle into Europe was followed by differential adaptation, selection, migration and genetic isolation, leading ultimately to the emergence of specialized breeds. We have studied the differentiation of European cattle by amplified fragment length polymorphism (AFLP) fingerprinting.
Negrini, R, Nijman, I J, Milanesi, E, Moazami-Goudarzi, K, Williams, J L, Erhardt, G, Dunner, S, Rodellar, C, Valentini, A, Bradley, D G, Olsaker, I, Kantanen, J, Ajmone-Marsan, P, Lenstra, J A, Laloë, D, Wiener, P, Burton, D, Weimann, C, Harlizius, B, Barre-Dirie, A, Mengers, A, Looft, C, Kalm, E, Cañón, J, Zaragoza, P, Martín-Burriel, I, Sanchez, A, Savarese, M C, Marchitelli, C, Zanotti, M, Pilla, F, Bruzzone, A, Iamartino, D, Holm, Lars-Erik, Eythorsdottir, E, Mommens, G, Dolf, G, Felius, M   +37 more
openaire   +5 more sources

The aquatic leaf beetle Macroplea mutica (Coleoptera: Chrysomelidae) in Europe: Population structure, postglacial colonization and the signature of passive dispersal

European Journal of Entomology, 2010
The pattern of postglacial re-colonization of Europe and the present population structure are known for various plant and animal species. The reed beetle Macroplea mutica (Fabricius, 1792) has characteristics that should influence both aspects in a ...
Michael MENDE, Olof BISTRÖM, Edda MEICHSSNER, Gregor KÖLSCH   +3 more
doaj   +1 more source

Seed remains of common millet from the 4th (Mongolia) and 15th (Hungary) centuries: AFLP, SSR and mtDNA sequence recoveries. [PDF]

, 2006
Seed remains of common millet (Panicum miliaceum L.) were excavated from sites of ad 4th-century Darhan (Mongolia), and ad 15th-century Budapest (Hungary).
Gyulai, Gábor, Heszky, László, Lágler, R., Tóth, Z., Bittsánszky, András, Szabó, Z., Gyulai, Ferenc, Humphreys, M.   +7 more
core   +1 more source