Identification and Development of Pathogen- and Pest-Specific Defense-Resistance-Associated SSR Marker Candidates Assisted by Machine Learning and Discovery of Putative QTL Hotspots in <i>Camellia sinensis</i>. [PDF]
Plants (Basel)Eminoğlu A.
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Genome-wide identification and immunological expression analysis of the C3HC4-type zinc finger protein genes in the silkworm, Bombyx Mori. [PDF]
BMC GenomicsLiu J +9 more
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Characterization of the aquaporin gene family in Pinus massoniana and functional analysis of PmNIP2;1 involved in high-temperature and drought stress. [PDF]
BMC Plant BiolLi Y, Li L, Ding G.
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TCR Repertoire Analysis Unveils the Link Between Kawasaki Disease and Viral Infection. [PDF]
BiomedicinesGeng Z +8 more
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<i>Mycobacterium tuberculosis</i> H37Rv Short Linear PDZ-Binding Motif Proteins at the Host-Pathogen Interface. [PDF]
Int J Mol SciSevilla-Reyes E +3 more
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Avoided motifs: short amino acid strings missing from protein datasets [PDF]
Biological Chemistry, 2021 Abstract According to the amino acid composition of natural proteins, it could be expected that all possible sequences of three or four amino acids will occur at least once in large protein datasets purely by chance. However, in some species or cellular context, specific short amino acid motifs are missing due to unknown reasons.
Pablo Mier, Miguel Andrade
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Germline-encoded amino acid–binding motifs drive immunodominant public antibody responses
Science, 2023 Despite the vast diversity of the antibody repertoire, infected individuals often mount antibody responses to precisely the same epitopes within antigens. The immunological mechanisms underpinning this phenomenon remain unknown. By mapping 376 immunodominant “public epitopes” at high resolution and characterizing several of their cognate antibodies, we
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Hydrogen-bond motifs in the crystals of hydrophobic amino acids
Acta Crystallographica Section B: Structural Science, 2008A computer program has been developed to survey a set of crystal structures for hydrogen-bond motifs. Possible ring and chain motifs are generated automatically from a user-defined list of interacting molecular fragments and intermolecular interactions.
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Novel motifs in amino acid permease genes from Leishmania
Biochemical and Biophysical Research Communications, 2004Eight amino acid permease genes from the protozoan parasite Leishmania donovani (AAPLDs) were cloned, sequenced, and shown to be expressed in promastigotes. Seven of these belong to the amino acid transporter-1 and one to the amino acid polyamino-choline superfamilies.
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