Results 11 to 20 of about 218,037 (308)
Amplicon-based metagenomic analysis of mixed fungal samples using proton release amplicon sequencing. [PDF]
PLoS ONE, 2014 Next generation sequencing technology has revolutionised microbiology by allowing concurrent analysis of whole microbial communities. Here we developed and verified similar methods for the analysis of fungal communities using a proton release sequencing ...
Daniel P Tonge +2 more
doaj +5 more sources
, 2023 The 16S rRNA amplicon sequencing technique is a microbiome analysis where different samples are analyzed at the same time using multiplexing. The results can be used to evaluate microbial diversity at genus, family, order, class, and phylum levels.
Andersson, Jasmine +3 more
core +2 more sources
Dissecting Disease-Suppressive Rhizosphere Microbiomes by Functional Amplicon Sequencing and 10x Metagenomics [PDF]
, 2021 Disease-suppressive soils protect plants against soilborne fungal pathogens that would otherwise cause root infections. Soil suppressiveness is, in most cases, mediated by the antagonistic activity of the microbial community associated with the plant ...
Tracanna, V. +12 more
core +1 more source
FAL1 ing inside an Amplicon [PDF]
Cancer Cell, 2014 Frequently amplified regions of the cancer genome contain well-known oncogenes. In this issue of Cancer Cell, Hu and colleagues discover that FAL1, a long noncoding RNA is encoded in one of these regions. FAL1 acts as an oncogene by stabilizing BMI1, which results in the repression of CDKN1A expression.
Alejandro Athie, Maite Huarte
openaire +2 more sources
Long-read amplicon denoising [PDF]
Nucleic Acids Research, 2019 Abstract Long-read next-generation amplicon sequencing shows promise for studying complete genes or genomes from complex and diverse populations. Current long-read sequencing technologies have challenging error profiles, hindering data processing and incorporation into downstream analyses.
Venkatesh Kumar +12 more
openaire +3 more sources
The origin and evolution of human ampliconic gene families and ampliconic structure [PDF]
Genome Research, 2006 Out of the nine male-specific gene families in the human Y chromosome amplicons, we investigate the origin and evolution of seven families for which gametologous and orthologous sequences are available. Proto-X/Y gene pairs in the original mammalian sex chromosomes played major roles in origins and gave rise to five gene families: XKRY, VCY, HSFY, RBMY,
Bejon Kumar, Bhowmick +2 more
openaire +2 more sources
, 2020 This version was used for the UMI project's 721 SSU rRNA amplicon data ...
kmooog
core +2 more sources
Frontiers in Microbiology, 2023 IntroductionBiological soil crusts (biocrusts) are known as biological hotspots on undisturbed, nutrient-poor bare soil surfaces and until now, are mostly observed in (semi-) arid regions but are currently poorly understood in agricultural systems.
Julia Katharina Kurth +11 more
doaj +1 more source
noelzach/Oomycete-Amplicon-Seq-Soybean-Rhizosphere: getting zenodo
, 2023 Manuscript about amplicon sequencing of oomycetes from soybean ...
Zachary Noel
core +1 more source