Results 21 to 30 of about 232,331 (307)

Integration of multi-omics data to elucidate keystone unknown taxa within microbialite-forming ecosystems

Frontiers in Microbiology, 2023
Microbes continually shape Earth’s biochemical and physical landscapes by inhabiting diverse metabolic niches. Despite the important role microbes play in ecosystem functioning, most microbial species remain unknown highlighting a gap in our ...
Rocío Amorín de Hegedüs, Rocío Amorín de Hegedüs, Ana Conesa, Jamie S. Foster   +3 more
doaj   +1 more source

Long-read amplicon denoising [PDF]

Nucleic Acids Research, 2019
Abstract Long-read next-generation amplicon sequencing shows promise for studying complete genes or genomes from complex and diverse populations. Current long-read sequencing technologies have challenging error profiles, hindering data processing and incorporation into downstream analyses.
Venkatesh Kumar, Thomas Vollbrecht, Mark Chernyshev, Sanjay Mohan, Brian Hanst, Nicholas Bavafa, Antonia Lorenzo, Nikesh Kumar, Robert Ketteringham, Kemal Eren, Michael Golden, Michelli F Oliveira, Ben Murrell   +12 more
openaire   +2 more sources

Microbiome Search Engine 2: a Platform for Taxonomic and Functional Search of Global Microbiomes on the Whole-Microbiome Level

mSystems, 2021
Metagenomic data sets from diverse environments have been growing rapidly. To ensure accessibility and reusability, tools that quickly and informatively correlate new microbiomes with existing ones are in demand.
Gongchao Jing, Lu Liu, Zengbin Wang, Yufeng Zhang, Li Qian, Chunxiao Gao, Meng Zhang, Min Li, Zhenkun Zhang, Xiaohan Liu, Jian Xu, Xiaoquan Su   +11 more
doaj   +1 more source

Amplicon generation.

, 2021
Amplicon generation.
Ingrid Somers (11457369), Anas Abdelqader (11457372), Alexandra L. Wealleans (11457375), Sandy Van de Craen (11457378), Dany Morisset (409470), Veerle Van Hoeck (209130)   +5 more
core   +1 more source

Amplicon counts.

, 2021
Targeted amplicon sequencing results. (XLSX)
Lilja Jansson (9620924), Miko Valori (5865947), Pentti J. Tienari (9620939)   +2 more
core   +1 more source

Unraveling the celiac disease-related immunogenic complexes in a set of wheat and tritordeum genotypes: implications for low-gluten precision breeding in cereal crops

Frontiers in Plant Science, 2023
The development of low-gluten immunogenic cereal varieties is a suitable way to fight the increment of pathologies associated with the consumption of cereals.
Miriam Marín-Sanz, Francisco Barro, Susana Sánchez-León   +2 more
doaj   +1 more source

Analysis of the genetic stucture of certain types of scaled carp

Ribogospodarsʹka Nauka Ukraïni, 2016
Purpose. Study of the genetic structure specificity, intra- and interpopulation genetic variation of the brood stocks of Ukrainian scaled carp from different fish farms of Ukraine using DNA markers (ISSR-PCR). Methodology. A PCR (ISSR-PCR) method with
А. Маriutsa, S. Tarasjuk, І. Hrytsyniak   +2 more
doaj   +1 more source

Amplicon-Based Detection and Sequencing of SARS-CoV-2 in Nasopharyngeal Swabs from Patients With COVID-19 and Identification of Deletions in the Viral Genome That Encode Proteins Involved in Interferon Antagonism

Viruses, 2020
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the causative agent of coronavirus disease 2019 (COVID-19). Sequencing the viral genome as the outbreak progresses is important, particularly in the identification of emerging isolates with ...
Shona C. Moore, Rebekah Penrice-Randal, Muhannad Alruwaili, Nadine Randle, Stuart Armstrong, Catherine Hartley, Sam Haldenby, Xiaofeng Dong, Abdulrahman Alrezaihi, Mai Almsaud, Eleanor Bentley, Jordan Clark, Isabel García-Dorival, Paul Gilmore, Ximeng Han, Benjamin Jones, Lisa Luu, Parul Sharma, Ghada Shawli, Yani Sun, Qin Zhao, Steven T. Pullan, Daniel P. Carter, Kevin Bewley, Jake Dunning, En-min Zhou, Tom Solomon, Michael Beadsworth, James Cruise, Derrick W. Crook, David A. Matthews, Andrew D. Davidson, Zana Mahmood, Waleed Aljabr, Julian Druce, Richard Vipond, Lisa Ng, Laurent Renia, Peter J. M. Openshaw, J. Kenneth Baillie, Miles W. Carroll, James Stewart, Alistair Darby, Malcolm Semple, Lance Turtle, Julian A. Hiscox   +45 more
doaj   +1 more source

KONFIRMASI AVIAN PARAMYXOVIRUS TIPE 1 (APMV-1) SECARA HISTOPATOLOGIS, SEROLOGIS, DAN MOLEKULER (Confirmation of Avian Paramyxovirus Tipe 1 (APMV-1) Infection by Histopathology, Serology, and Molecular Method)

Jurnal Kedokteran Hewan, 2016
Research was conducted to detect APMV-1 infection by examining microscopic lesions of chicken suspected ND and confirming the causative agent with serological and molecular assay.
I Gusti Agung Arta Putra, Anak Agung Ayu Mirah Adi   +1 more
doaj   +1 more source

Variation in Snow Algae Blooms in the Coast Range of British Columbia

Frontiers in Microbiology, 2020
Snow algae blooms cover vast areas of summer snowfields worldwide, reducing albedo and increasing snow melt. Despite their global prevalence, little is known about the algae species that comprise these blooms. We used 18S and rbcL metabarcoding and light
Casey B. Engstrom, Kurt M. Yakimovich, Lynne M. Quarmby   +2 more
doaj   +1 more source