Results 21 to 30 of about 6,522,900 (275)

Multilocus sequence typing breathes life into a microbial metagenome [PDF]

, 2006
Shot-gun sequencing of DNA isolated from the environment and the assembly of metagenomes from the resulting data has considerably advanced the study of microbial diversity.
Vandamme Peter, Dowson, Chris G., Mahenthiralingam Eshwar, Dowson Chris G., Adam Baldwin, Pavel Drevinek, Vandamme, Peter, Elke Vanlaere, John J LiPuma, Vanlaere, Elke, Dowson, Christopher G., LiPuma, John J., Drevinek, Pavel, LiPuma John J., Baldwin Adam, Peter Vandamme, Baldwin, Adam, Chris G Dowson, Eshwar Mahenthiralingam, Drevinek Pavel, Vanlaere Elke, Dowson, Chris G, Mahenthiralingam, Eshwar, LiPuma, John J   +23 more
core   +2 more sources

An overview of the evolution of infrared spectroscopy applied to bacterial typing [PDF]

, 2017
The sustained emergence of new declared bacterial species makes typing a continuous challenge for microbiologists. Molecular biology techniques have a very significant role in the context of bacterial typing, but they are often very laborious, time ...
Cristina Quintelas, Quintelas, Cristina, Ferreira, Eugénio C., Eugénio C. Ferreira, Sousa, C., Lopes, João A., João A. Lopes, Clara Sousa   +7 more
core   +1 more source

Multilocus sequence typing of a global collection of pasteurella multocida isolates from cattle and other host species demonstrates niche association [PDF]

, 2011
Background- Pasteurella multocida causes disease in many host species throughout the world. In bovids, it contributes to bovine respiratory disease (BRD) and causes haemorrhagic septicaemia (HS).
Hodgson, J.C., Hodgson, J. Christopher, Lainson, F. Alex, J Christopher Hodgson, Lainson, F.A., Emily J Hotchkiss, Zadoks, R.N., F Alex Lainson, Hotchkiss, E.J., Zadoks, Ruth N., Hotchkiss, Emily J., Ruth N Zadoks, Lainson, A.F.   +12 more
core   +1 more source

Protocol for bacterial typing using Fourier transform infrared spectroscopy [PDF]

, 2023
[EN]The Fourier transform infrared (FT-IR) signals obtained from bacterial samples are specific and reproducible, making FT-IR an efficient tool for bacterial typing at a subspecies level.
Shaoning Yu, Wang, Li, Shi, Haimei, Chuanfan Ding, Li Zhang, Prieto Maradona, Miguel, Avelino Alvarez-Ordóñez, Liangqiang Chen, Shouning Yang, Yu, Shaoning, Shen, Hao, Ding, Chuanfan, Miguel Prietod, Fan Yang, Álvarez Ordóñez, Avelino, Chen, Liangqiang, Feng, Bin, Bin Feng, Zhang, Li, Hao Shen, Yang, Huayang, Jianhua Zhu, Huayan Yang, Li Wang, Yang, Fan, Zhu, Jianhua, Yang, Shouning, Haimei Shi   +27 more
core   +1 more source

High-throughput multilocus sequence typing: bringing molecular typing to the next level. [PDF]

PLoS ONE, 2012
Multilocus sequence typing (MLST) is a widely used system for typing microorganisms by sequence analysis of housekeeping genes. The main advantage of MLST in comparison to other typing techniques is the unambiguity and transferability of sequence data ...
Stefan A Boers, Wil A van der Reijden, Ruud Jansen   +2 more
doaj   +1 more source

Typing of Pseudomonas aeruginosa from hospitalized patients: a comparison of susceptibility and biochemical profiles with genotype

Brazilian Journal of Medical and Biological Research, 2004
Typing techniques are essential for understanding hospital epidemiology, permitting the elucidation of the source of infection and routes of bacterial transmission.
A.L. Freitas, A.L. Barth
doaj   +1 more source

Genomic epidemiology in Streptococcus suis: Moving beyond traditional typing techniques

Heliyon
Streptococcus suis is a bacterial gram-positive pathogen that causes invasive infections in swine and is also a zoonotic disease agent. Traditional molecular typing techniques such as ribotyping, multilocus sequence typing, pulse-field gel ...
Rujirat Hatrongjit, Nahuel Fittipaldi, Marcelo Gottschalk, Anusak Kerdsin   +3 more
doaj   +1 more source

Dataset for "Protocol for Bacterial Typing using Fourier Transform Infrared Spectroscopy"

, 2023
Efficient, accurate, and reproducible bacterial typing is highly demanded in hospital hygiene management for infection control, epidemiological studies, tracking of bacterial cross-transmission, and monitoring of medical treatment processes.
Yang, H (via Mendeley Data), Yang, Huayan   +1 more
core   +2 more sources

Genotyping, Plasmid Analysis, and Antimicrobial Susceptibility of Salmonella enterica Serotype Enteritidis Isolates from Humans and Chickens in Central Taiwan

Journal of the Formosan Medical Association, 2009
Salmonella enterica serotype Enteritidis (SE) is the most frequent etiological agent of human salmonellosis. The molecular epidemiology and antimicrobial susceptibility of human and chicken isolates of SE were examined.
Chishih Chu, Ding-Wei Wong, Mei-Hui Wang, Hsin-Hung Lin, Yi-Sheng Chen, Ni Tien, Mu-Chin Shih, Ter-Hsin Chen, Cheng-Hsun Chiu   +8 more
doaj   +1 more source

Fourier-transform infrared spectroscopy for typing of vancomycin-resistant Enterococcus faecium: performance analysis and outbreak investigation

Microbiology Spectrum, 2023
Vancomycin-resistant Enterococci, mainly Enterococcus faecium (VREfm), are causing nosocomial infections and outbreaks. Bacterial typing methods are used to assist in outbreak investigations.
T. C. Scheier, J. Franz, M. Boumasmoud, F. Andreoni, B. Chakrakodi, B. Duvnjak, A. Egli, W. Zingg, A. Ramette, A. Wolfensberger, R. D. Kouyos, S. D. Brugger   +11 more
doaj   +1 more source