Results 61 to 70 of about 31,734 (247)
Stochastic Variational Inference for Bayesian Phylogenetics: A Case of CAT Model [PDF]
Molecular Biology and Evolution, 2018 Abstract The pattern of molecular evolution varies among gene sites and genes in a genome. By taking into account the complex heterogeneity of evolutionary processes among sites in a genome, Bayesian infinite mixture models of genomic evolution enable robust phylogenetic inference.
Dang, Tung, Kishino, Hirohisa
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Advanced Science, EarlyView.As a pilot phase of the Central Asian Genomic Diversity Project, whole‐genome sequencing of 166 individuals from 20 Central Asian and Afghan Hazara populations reveals fine‐scale substructure shaped by repeated trans‐Eurasian migration and admixture. Integrated analyses uncover post‐admixture adaptation, archaic introgression, and medically relevant ...
Mengge Wang +11 more
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Journal of FungiIn this study, 15 Lulworthiales strains isolated from the marine tunicate Halocynthia papillosa collected in the central Tyrrhenian Sea were characterized using a polyphasic approach (morpho-physiological, molecular, and phylogenetic analyses).
Martina Braconcini +4 more
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Data supporting a molecular phylogeny of the hyper-diverse genus Brueelia
Data in Brief, 2015 Data is presented in support of a phylogenetic reconstruction of one of the largest, and most poorly understood, groups of lice: the Brueelia-complex (Bush et al., 2015 [1]).
Sarah E. Bush +8 more
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Variational Combinatorial Sequential Monte Carlo Methods for Bayesian Phylogenetic Inference
CoRR, 2021 15 pages, 9 ...
Antonio Khalil Moretti +5 more
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Advanced Science, EarlyView.Caspofungin heteroresistance is prevalent in clinical Candida glabrata isolates and depends on calcineurin‐mediated stress adaptation. This transient phenotype serves as a reservoir for resistance evolution, enabling the emergence of stable resistant descendants under prolonged drug pressure.
Yanyu Su +7 more
wiley +1 more source
Calibrated Birth–Death Phylogenetic Time-Tree Priors for Bayesian Inference [PDF]
Systematic Biology, 2014 Here we introduce a general class of multiple calibration birth-death tree priors for use in Bayesian phylogenetic inference. All tree priors in this class separate ancestral node heights into a set of "calibrated nodes" and "uncalibrated nodes" such that the marginal distribution of the calibrated nodes is user-specified whereas the density ratio of ...
Heled, Joseph, Drummond, Alexei J.
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Transposable Element–Driven PIEZO Mutation Enhances Locust Flight in Plateau Hypoxia
Advanced Science, EarlyView.Why transposable elements (TEs) persisted or expanded in genomes remains a mystery. Using integrated analysis of TE macro‐ and microevolution in locusts, our results showed that thousands of TE insertions promoted widespread adaptive variation. Subfamilies of candidate adaptive TEs amplified and reshaped species‐level genomic architecture.
Xuanzhao Li +8 more
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The mitochondrial genome of the bamboo false cobra (Pseudoxenodon bambusicola)
Mitochondrial DNA. Part B. Resources, 2019 Pseudoxenodon is a genus of snakes belonging to the family Colubridae. In this study, the mitochondrial genome sequence of Pseudoxenodon bambusicola was generated through the next-generation sequencing technique.
Dan He
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Insects, 2023 The molecular phylogeny of the Cimicoidea was reconstructed from an expanded sampling based on mitochondrial (16S, COI) and nuclear (18S, 28SD3) genes. The data were analyzed using maximum likelihood (ML), maximum parsimony (MP), and Bayesian inference ...
Sunghoon Jung +3 more
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