Results 271 to 280 of about 1,682,340 (366)

Positional distribution of transcription factor binding sites in the human genome. [PDF]

PLoS One
Yu CP, Soh ZT, Bhattacharjee MJ, Li WH.
europepmc   +1 more source

Referee report. For: RBP-Tar – a searchable database for experimental RBP binding sites [version 3; peer review: 2 approved, 4 approved with reservations]

Zhi‐Ping Liu
openalex   +1 more source

A polymorphism at the microRNA binding site in the 3' untranslated region of RYR3 is associated with outcome in hepatocellular carcinoma

, 2015
Xiaolan Zhang, Zhanjun Guo, Xiaoyan Wu, Chenxing Peng   +3 more
openalex   +2 more sources

Hyperactive ice‐binding proteins stabilize cell membranes and improve resistance to dehydration stress in Caenorhabditis elegans

FEBS Open Bio, EarlyView.
TisIBP8, a fungal‐derived hyperactive ice‐binding protein, helps Caenorhabditis elegans survive dehydration. It localizes near cell membranes, reduces cell damage, and helps maintain membrane structure during drying. These results suggest that ice‐binding proteins can protect cells from dehydration stress as well as freezing stress.
Daiki Shimose, Kotaro Ozaki, Ryohei Kuriyama, Yuka Ikemoto, Kazuhiro Mio, Yuji C. Sasaki, Tatsuya Arai, Sakae Tsuda, Yoichi Shinkai, Masahiro Kuramochi   +9 more
wiley   +1 more source

ViralBindPredict: empowering viral protein-ligand binding sites through deep learning and protein sequence-derived insights. [PDF]

Gigascience
Amorim AMB, Marques-Pereira C, Almeida T, Rosário-Ferreira N, Pinto HS, Vaz C, Francisco A, Moreira IS.   +7 more
europepmc   +1 more source

Thermodynamics of Water Displacement from Binding Sites and its Contributions to Supramolecular and Biomolecular Affinity

Setiadi, Jeffry, Biedermann, Frank, Nau, Werner M., Gilson, Michael K.   +3 more
openalex   +1 more source

Fast and Accurate Genome-Scale Identification of DNA-Binding Sites

, 2018
David I. K. Martin, Vincent Maillol, Éric Rivals   +2 more
openalex   +2 more sources

Molecular characterization of covRS mutations in M1UK Streptococcus pyogenes

FEBS Open Bio, EarlyView.
Group A Streptococcus (GAS) acquires covRS mutations driving a hypervirulent bacterial state, frequently associated with invasive disease‐like necrotizing fasciitis. We demonstrate that the newly emerged M1UK GAS lineage can also acquire these mutations.
Jarrad Pritchard, Emma‐Jayne Proctor, Jiawa Wang, Nikolas P. Johnston, Andrew Hayes, Georgia McCorkell, Haibo Yu, Jai Tree, Mark R. Davies, Mark J. Walker, Ronald Sluyter, Stephan Brouwer, Martina L. Sanderson‐Smith   +12 more
wiley   +1 more source

EpiXFormer: a cross-attention neural network for predicting cell type-specific transcription factor binding sites. [PDF]

Brief Bioinform
Peng Y, Liu X, Wu J, Lin S, Zhan S, Li H, Wang J, Zhao X.   +7 more
europepmc   +1 more source

Transcripts enriched in codons that trigger P‐site tRNA‐mediated mRNA decay possess stable mRNA

FEBS Open Bio, EarlyView.
PTMD codons were first described by Mendel et al. as mediators of an mRNA decay pathway dependent on the human protein CNOT3, homologous to yeast Not5. Our findings confirm that PTMD codons destabilize transcripts; however, unlike in yeast, the human pathway specifically targets and slightly destabilizes primarily stable mRNAs.
Rodolfo Lopes Carneiro, Fernando Lucas Palhano   +1 more
wiley   +1 more source