Results 91 to 100 of about 2,499 (218)

Marky: a lightweight web tracking tool for document annotation [PDF]

open access: yes, 2014
Document annotation is an elementary task in the development of Text Mining applications, notably in defining the entities and relationships that are relevant to a given domain. Many annotation software tools have been implemented. Some are particular to
D. Ferrucci   +4 more
core   +1 more source

Mining clinical attributes of genomic variants through assisted literature curation in Egas [PDF]

open access: yes, 2016
The veritable deluge of biological data over recent years has led to the establishment of a considerable number of knowledge resources that compile curated information extracted from the literature and store it in structured form, facilitating its use ...
Campos, David   +6 more
core   +3 more sources

Integrated Analysis of microRNA Targets Reveals New Insights into Transcriptional–Post-Transcriptional Regulatory Cross-Talk

open access: yesBiology
It is becoming increasingly clear that microRNAs are key players in gene regulatory networks, modulating gene expression at post-transcriptional level.
Simona Panni, Roberto Pizzolotto
doaj   +1 more source

The art of curation at a biological database: Principles and application

open access: yesCurrent Plant Biology, 2017
The variety and quantity of data being produced by biological research has grown dramatically in recent years, resulting in an expansion of our understanding of biological systems. However, this abundance of data has brought new challenges, especially in
Sarah G. Odell   +4 more
doaj   +1 more source

IMGT® Biocuration and Comparative Study of the T Cell Receptor Beta Locus of Veterinary Species Based on Homo sapiens TRB

open access: yesFrontiers in Immunology, 2020
IMGT®, the international ImMunoGeneTics information system® is the global reference in immunogenetics and immunoinformatics. By its creation in 1989 by Marie-Paule Lefranc (Université de Montpellier and CNRS), IMGT® marked the advent of immunoinformatics,
Perrine Pégorier   +10 more
doaj   +1 more source

Data publications correlate with citation impact [PDF]

open access: yes, 2016
Neuroscience and molecular biology have been generating large atasets over the past years that are reshaping how research is being conducted.In their wake, open data sharing has been singled out as a major challenge for the future of research.
Bielza Lozoya, María Concepción   +3 more
core   +2 more sources

A community of biocurators

open access: yesNature Precedings, 2010
AbstractBiocuration is a difficult mission: biological data is highly heterogeneous, and there are few areas where guidelines for data preservation and exchange exist. This has hampered the speed, quantity and diversity of data possible to capture.
openaire   +1 more source

COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms

open access: yesMolecular Systems Biology, 2021
We need to effectively combine the knowledge from surging literature with complex datasets to propose mechanistic models of SARS‐CoV‐2 infection, improving data interpretation and predicting key targets of intervention.
Marek Ostaszewski   +139 more
doaj   +1 more source

Ranking Interactions for a Curation Task [PDF]

open access: yes, 2011
One of the key pieces of information which biomedical text mining systems are expected to extract from the literature are interactions among different types of biomedical entities (proteins, genes, diseases, drugs, etc.).
Clematide, S, Rinaldi, Fabio
core   +1 more source

Integrating text mining into the MGI biocuration workflow [PDF]

open access: yesDatabase, 2009
AbstractA major challenge for the development of resources for functional and comparative genomics is the extraction of data from the biomedical literature. Although text retrieval and extraction for biological data is an active research field, few applications have been integrated into production literature curation systems such as those of the model ...
Dowell, K G   +4 more
openaire   +3 more sources

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