Results 71 to 80 of about 1,082 (162)
Text-mining-assisted biocuration workflows in Argo [PDF]
Database, 2014 Les activités de biocuration ont été largement classées dans la sélection des documents pertinents, l'annotation des concepts biologiques d'intérêt et l'identification des interactions entre les concepts. Il a été démontré que l'exploration de texte avait le potentiel de réduire considérablement l'effort des biocurateurs dans les trois activités, et ...
Rafał Rak +4 more
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Representation of non-coding RNA-mediated regulation of gene expression using the Gene Ontology
RNA BiologyRegulatory non-coding RNAs (ncRNAs) are increasingly recognized as integral to the control of biological processes. This is often through the targeted regulation of mRNA expression, but this is by no means the only mechanism through which regulatory ...
Giulia Antonazzo +3 more
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Jointly creating digital abstracts: dealing with synonymy and polysemy
BMC Research Notes, 2012 Background Ideally each Life Science article should get a ‘structured digital abstract’. This is a structured summary of the paper’s findings that is both human-verified and machine-readable.
Vercruysse Steven, Kuiper Martin
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C/VDdb: A multi-omics expression profiling database for a knowledge-driven approach in cardiovascular disease (CVD). [PDF]
PLoS ONE, 2018 The cardiovascular disease (C/VD) database is an integrated and clustered information resource that covers multi-omic studies (microRNA, genomics, proteomics and metabolomics) of cardiovascular-related traits with special emphasis on coronary artery ...
Marco Fernandes +2 more
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Integrating text mining into the MGI biocuration workflow [PDF]
Database, 2009 AbstractA major challenge for the development of resources for functional and comparative genomics is the extraction of data from the biomedical literature. Although text retrieval and extraction for biological data is an active research field, few applications have been integrated into production literature curation systems such as those of the model ...
Karen G. Dowell +4 more
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BiologyIt is becoming increasingly clear that microRNAs are key players in gene regulatory networks, modulating gene expression at post-transcriptional level.
Simona Panni, Roberto Pizzolotto
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The art of curation at a biological database: Principles and application
Current Plant Biology, 2017 The variety and quantity of data being produced by biological research has grown dramatically in recent years, resulting in an expansion of our understanding of biological systems. However, this abundance of data has brought new challenges, especially in
Sarah G. Odell +4 more
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Frontiers in Immunology, 2020 IMGT®, the international ImMunoGeneTics information system® is the global reference in immunogenetics and immunoinformatics. By its creation in 1989 by Marie-Paule Lefranc (Université de Montpellier and CNRS), IMGT® marked the advent of immunoinformatics,
Perrine Pégorier +10 more
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Current Plant Biology, 2016 MCDRP or ‘Manually Curated Database of Rice Proteins’ is a database of digitized experimental datasets on rice proteins. Every aspect of the experimental data published in peer-reviewed research articles on rice biology has been digitized with the help ...
Saurabh Raghuvanshi +2 more
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COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
Molecular Systems Biology, 2021 We need to effectively combine the knowledge from surging literature with complex datasets to propose mechanistic models of SARS‐CoV‐2 infection, improving data interpretation and predicting key targets of intervention.
Marek Ostaszewski +139 more
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