Characterization and automated classification of sentences in the biomedical literature: a case study for biocuration of gene expression and protein kinase activity. [PDF]
Raciti D +5 more
europepmc +2 more sources
Inside FlyBase: Biocuration as a career [PDF]
As research in the biological sciences continues to advance at a rapid pace, it is increasingly important that the data be captured, standardized, organized and made accessible to the scientific community. This is the job of a biocurator. Here we describe the process of biocuration from our perspective as FlyBase curators.
Susan St. Pierre, Peter McQuilton
openalex +3 more sources
Announcing the launch of Protein Data Bank China as an Associate Member of the Worldwide Protein Data Bank Partnership. [PDF]
The formal launch of Protein Data Bank China (PDBc) is announced, and the history of the wwPDB, recently established mechanisms for adding new wwPDB data centers and the processes developed to bring PDBc into the partnership are described.The Protein Data Bank (PDB) is the single global archive of atomic‐level, three‐dimensional structures of ...
Xu W +5 more
europepmc +2 more sources
<em> GigaScience are regular attendees of the International Biocuration Conference, and you may have read our write-ups ups going back to 2012 edition. This year Biocuration is back behind the bamboo curtain, with the 11th conference held in the Crowne Plaza Hotel Shanghai from April 8th-11th and hosted by Fudan University.
Mary Ann Tuli
openalex +2 more sources
Text-mining-assisted biocuration workflows in Argo [PDF]
Les activités de biocuration ont été largement classées dans la sélection des documents pertinents, l'annotation des concepts biologiques d'intérêt et l'identification des interactions entre les concepts. Il a été démontré que l'exploration de texte avait le potentiel de réduire considérablement l'effort des biocurateurs dans les trois activités, et ...
Rafał Rak +4 more
openalex +4 more sources
Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference [PDF]
The 5th International Biocuration Conference brought together over 300 scientists to exchange on their work, as well as discuss issues relevant to the International Society for Biocuration's (ISB) mission. Recurring themes this year included the creation and promotion of gold standards, the need for more ontologies, and more formal interactions with ...
Gaudet, Pascale +27 more
openaire +4 more sources
Expert Panel Curation of 113 Primary Mitochondrial Disease Genes for the Leigh Syndrome Spectrum
Objective Primary mitochondrial diseases (PMDs) are heterogeneous disorders caused by inherited mitochondrial dysfunction. Classically defined neuropathologically as subacute necrotizing encephalomyelopathy, Leigh syndrome spectrum (LSS) is the most frequent manifestation of PMD in children, but may also present in adults.
Elizabeth M. McCormick +47 more
wiley +1 more source
Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns [PDF]
Biological processes are accomplished by the coordinated action of gene products. Gene products often participate in multiple processes, and can therefore be annotated to multiple Gene Ontology (GO) terms.
Valerie Wood +13 more
doaj +1 more source
Evolution and adoption of contributor role ontologies and taxonomies
Abstract Contributor Role Ontologies and Taxonomies (CROTs) are standard vocabularies to describe individual contributions to a scholarly project or research output. Contributor Roles Taxonomy (CRediT) is one of the most widely used CROTs, and has been adopted by numerous journals to describe author's contributions, and recently formalized as a ANSI ...
Mohammad Hosseini +5 more
wiley +1 more source
Biocuration - mapping resources and needs [version 1; peer review: 2 approved]
Background: Biocuration involves a variety of teams and individuals across the globe. However, they may not self-identify as biocurators, as they may be unaware of biocuration as a career path or because biocuration is only part of their role.
Alexandra Holinski +4 more
doaj +1 more source

