Results 21 to 30 of about 2,351 (208)

IMGT® Biocuration and Analysis of the Rhesus Monkey IG Loci [PDF]

Vaccines, 2022
The adaptive immune system, along with the innate immune system, are the two main biological processes that protect an organism from pathogens. The adaptive immune system is characterized by the specificity and extreme diversity of its antigen receptors.
Viviane Nguefack Ngoune, Morgane Bertignac, Maria Georga, Ariadni Papadaki, Alexandre Albani, Géraldine Folch, Joumana Jabado-Michaloud, Véronique Giudicelli, Patrice Duroux, Marie-Paule Lefranc, Sofia Kossida   +10 more
openaire   +4 more sources

First Plant Cell Atlas symposium report

Plant Direct, Volume 6, Issue 6, June 2022., 2022
Abstract The Plant Cell Atlas (PCA) community hosted a virtual symposium on December 9 and 10, 2021 on single cell and spatial omics technologies. The conference gathered almost 500 academic, industry, and government leaders to identify the needs and directions of the PCA community and to explore how establishing a data synthesis center would address ...
Selena L. Rice, Elena Lazarus, Christopher Anderton, Kenneth Birnbaum, Jennifer Brophy, Benjamin Cole, Diane Dickel, David Ehrhardt, Noah Fahlgren, Margaret Frank, Elizabeth Haswell, Shao‐shan Carol Huang, Samuel Leiboff, Marc Libault, Marisa S. Otegui, Nicholas Provart, R. Glen Uhrig, Seung Y. Rhee, The Plant Cell Atlas Consortium   +18 more
wiley   +2 more sources

Changes in Scholarly Communication and the Potential Impact on Biocuration [PDF]

Nature Precedings, 2009
AbstractOpen access in particular and changes in on-line scholarship have the potential to impact biocuration which often involves translating information currently read in papers to knowledge that is found in a variety of biological resources. The implication of these changes in scholarly communication to the biocuration process will be discussed with
Philip E. Bourne
  +5 more sources

UIMA in the Biocuration Workflow: A coherent framework for cooperation between biologists and computational linguists [PDF]

, 2009
As collaborating partners, Barcelona Media Innovation Centre and GRIB (Universitat Pompeu Fabra) seek to combine strengths from Computational Linguistics and Biomedicine to produce a robust Text Mining system to generate data that will help biocurators ...
Bart Mellebeek, Carlos Rodriguez-Penagos, Laura Ines Furlong   +2 more
core   +3 more sources

BI‐LAVA: Biocuration With Hierarchical Image Labelling Through Active Learning and Visual Analytics

Computer Graphics Forum, Volume 44, Issue 1, February 2025.
BI‐LAVA is an innovative labeling system designed for the hierarchical annotation of image modalities in biocuration. By integrating visual analytics with machine learning techniques, BI‐LAVA facilitates the understanding of biomedical datasets for users with limited expertise.
Juan Trelles, Andrew Wentzel, William Berrios, Hagit Shatkay, G. Elisabeta Marai   +4 more
wiley   +2 more sources

Integrating text mining into the MGI biocuration workflow [PDF]

Database, 2009
AbstractA major challenge for the development of resources for functional and comparative genomics is the extraction of data from the biomedical literature. Although text retrieval and extraction for biological data is an active research field, few applications have been integrated into production literature curation systems such as those of the model ...
Dowell, K G, McAndrews, Hill M, Hill, D P, Drabkin, H J, Blake, J A   +4 more
  +8 more sources

Biocuration Virtual Issue 2012 [PDF]

Database, 2012
Curated databases are a cornerstone of research in the life sciences providing essential encyclopedic-like reference information on genes, their products and interactions, nomenclature standards, reference genome sequences and their annotations. Research laboratories and experimental techniques rely on resources such as databases and bioinformatics ...
Pascale Gaudet, Raja Mazumder
openaire   +4 more sources

Student biocuration projects as a learning environment [version 2; peer review: 2 approved] [PDF]

F1000Research, 2022
Background: Bioinformatics is becoming an essential tool for the majority of biological and biomedical researchers. Although bioinformatics data is exploited by academic and industrial researchers, limited focus is on teaching this area to undergraduates,
De Miranda Pinheiro, Sandra, Lovering, Ruth C, Thurlow, Katherine E   +2 more
core   +2 more sources

Announcing the launch of Protein Data Bank China as an Associate Member of the Worldwide Protein Data Bank Partnership. [PDF]

Acta Crystallogr D Struct Biol, 2023
The formal launch of Protein Data Bank China (PDBc) is announced, and the history of the wwPDB, recently established mechanisms for adding new wwPDB data centers and the processes developed to bring PDBc into the partnership are described.The Protein Data Bank (PDB) is the single global archive of atomic‐level, three‐dimensional structures of ...
Xu W, Velankar S, Patwardhan A, Hoch JC, Burley SK, Kurisu G.   +5 more
europepmc   +2 more sources

Openness and trust in data-intensive science: the case of biocuration. [PDF]

Med Health Care Philos, 2020
AbstractData-intensive science comes with increased risks concerning quality and reliability of data, and while trust in science has traditionally been framed as a matter of scientists being expected to adhere to certain technical and moral norms for behaviour, emerging discourses of open science present openness and transparency as substitutes for ...
Gabrielsen AM.
europepmc   +4 more sources