Automatic identification of scientific publications describing digital reconstructions of neural morphology. [PDF]
Brain Inform, 2023 The increasing number of peer-reviewed publications constitutes a challenge for biocuration. For example, NeuroMorpho.Org, a sharing platform for digital reconstructions of neural morphology, must evaluate more than 6000 potentially relevant articles per
Maraver P, Tecuatl C, Ascoli GA.
europepmc +2 more sources
Working in biocuration: contemporary experiences and perspectives. [PDF]
Database (Oxford)Davies SR.
europepmc +2 more sources
Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy. [PDF]
Database (Oxford)Martinez K +35 more
europepmc +2 more sources
Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (Oryza sativa). [PDF]
Plants (Basel), 2023 Modeling biological processes and genetic-regulatory networks using in silico approaches provides a valuable framework for understanding how genes and associated allelic and genotypic differences result in specific traits.
Naithani S +4 more
europepmc +2 more sources
TrialSieve: A Comprehensive Biomedical Information Extraction Framework for PICO, Meta-Analysis, and Drug Repurposing. [PDF]
Bioengineering (Basel)This work introduces TrialSieve, a novel framework for biomedical information extraction that enhances clinical meta-analysis and drug repurposing. By extending traditional PICO (Patient, Intervention, Comparison, Outcome) methodologies, TrialSieve ...
Kartchner D +14 more
europepmc +2 more sources
wwPDB biocuration: on the front line of structural biology [PDF]
Nature Methods, 2021 Biocurators, the backbone of the wwPDB, manage structural biology data deposition, quality, and integrity, and provide integral support to the research community worldwide.
Jasmine Y. Young +2 more
openaire +3 more sources
Expert Panel Curation of 113 Primary Mitochondrial Disease Genes for the Leigh Syndrome Spectrum
Annals of Neurology, Volume 94, Issue 4, Page 696-712, October 2023., 2023 Objective Primary mitochondrial diseases (PMDs) are heterogeneous disorders caused by inherited mitochondrial dysfunction. Classically defined neuropathologically as subacute necrotizing encephalomyelopathy, Leigh syndrome spectrum (LSS) is the most frequent manifestation of PMD in children, but may also present in adults.
Elizabeth M. McCormick +47 more
wiley +1 more source
Text mining for identification of biological entities related to antibiotic resistant organisms. [PDF]
PeerJ, 2022 Antimicrobial resistance is a significant public health problem worldwide. In recent years, the scientific community has been intensifying efforts to combat this problem; many experiments have been developed, and many articles are published in this area.
Fortunato Costa K +4 more
europepmc +3 more sources
Evolution and adoption of contributor role ontologies and taxonomies
Learned Publishing, Volume 36, Issue 2, Page 275-284, April 2023., 2023 Abstract Contributor Role Ontologies and Taxonomies (CROTs) are standard vocabularies to describe individual contributions to a scholarly project or research output. Contributor Roles Taxonomy (CRediT) is one of the most widely used CROTs, and has been adopted by numerous journals to describe author's contributions, and recently formalized as a ANSI ...
Mohammad Hosseini +5 more
wiley +1 more source
RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D
Protein Science, Volume 31, Issue 12, December 2022., 2022 Abstract Now in its 52nd year of continuous operations, the Protein Data Bank (PDB) is the premiere open‐access global archive housing three‐dimensional (3D) biomolecular structure data. It is jointly managed by the Worldwide Protein Data Bank (wwPDB) partnership.
Stephen K. Burley +40 more
wiley +1 more source