Results 71 to 80 of about 2,499 (218)
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR [PDF]
, 2012 WormBase, dictyBase and The Arabidopsis Information Resource (TAIR) are model organism databases containing information about Caenorhabditis elegans and other nematodes, the social amoeba Dictyostelium discoideum and related Dictyostelids and the ...
Basu, Siddhartha +12 more
core +1 more source
Using machine learning tools for protein database biocuration assistance [PDF]
, 2018 Biocuration in the omics sciences has become paramount, as research in these fields rapidly evolves towards increasingly data-dependent models. As a result, the management of web-accessible publicly-available databases becomes a central task in ...
Alquézar Mancho, René +5 more
core +3 more sources
Vaccines, 2023 Background: Myasthenia Gravis (MG) is a rare autoimmune disease presenting with auto-antibodies that affect the neuromuscular junction. In addition to symptomatic treatment options, novel therapeutics include monoclonal antibodies (mAbs).
Rebecca Golfinopoulou +3 more
doaj +1 more source
Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase [PDF]
, 2020 Biological knowledgebases rely on expert biocuration of the research literature to maintain up-to-date collections of data organized in machine-readable form.
Arnaboldi, Valerio +5 more
core
Protein Science, Volume 34, Issue 4, April 2025.Abstract The easiest and often most useful way to work with experimentally determined or computationally predicted structures of biomolecules is by viewing their three‐dimensional (3D) shapes using a molecular visualization tool. Mol* was collaboratively developed by RCSB Protein Data Bank (RCSB PDB, RCSB.org) and Protein Data Bank in Europe (PDBe ...
Sebastian Bittrich +14 more
wiley +1 more source
Representation of non-coding RNA-mediated regulation of gene expression using the Gene Ontology
RNA BiologyRegulatory non-coding RNAs (ncRNAs) are increasingly recognized as integral to the control of biological processes. This is often through the targeted regulation of mRNA expression, but this is by no means the only mechanism through which regulatory ...
Giulia Antonazzo +3 more
doaj +1 more source
Automated assessment of biological database assertions using the scientific literature
BMC Bioinformatics, 2019 Background The large biological databases such as GenBank contain vast numbers of records, the content of which is substantively based on external resources, including published literature.
Mohamed Reda Bouadjenek +2 more
doaj +1 more source
The BioGRID Interaction Database: 2011 update [PDF]
, 2011 The Biological General Repository for Interaction Datasets (BioGRID) is a public database that archives and disseminates genetic and protein interaction data from model organisms and humans (http://www.thebiogrid.org).
A. Chatr-aryamontri +30 more
core +4 more sources
BI‐LAVA: Biocuration With Hierarchical Image Labelling Through Active Learning and Visual Analytics
Computer Graphics Forum, Volume 44, Issue 1, February 2025.BI‐LAVA is an innovative labeling system designed for the hierarchical annotation of image modalities in biocuration. By integrating visual analytics with machine learning techniques, BI‐LAVA facilitates the understanding of biomedical datasets for users with limited expertise.
Juan Trelles +4 more
wiley +1 more source
Mapping the landscape of biocuration – where are the biocurators and what do they need?
, 2019 These slides were presented as part of a workshop on ‘Mapping the landscape of biocuration’ at the Biocuration 2019 conference. This work forms part of an ELIXIR Implementation Study. The slides are a summary of the preliminary analysis of a survey conducted by ELIXIR and the International Society of Biocuration which was designed to map the landscape ...
Alexandra Holinski +4 more
openalex +2 more sources