Midkine (MDK) is a mediator of the interaction between pancreatic cancer and beta cells. MDK, which originated from pancreatic ductal adenocarcinoma cells, exerted deleterious effects on paraneoplastic beta cells by binding to the SDC4 receptor on the beta cell surface and subsequently downregulating the Ras signaling pathway, thereby impairing insulin
Zengyu Feng+7 more
wiley +1 more source
Topolow: a mapping algorithm for antigenic cross-reactivity and binding affinity assays. [PDF]
Arhami O, Rohani P.
europepmc +1 more source
Statistical Methods in Bioinformatics: An Introduction [PDF]
Jotun Hein
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In this study, Acod1 knockout in CLP mice significantly increases peripheral blood NET levels, exacerbating inflammation, organ damage, and reducing survival. Further research shows that UBR5 interacts with PAD4, a key NET formation protein. Acod1/itaconate (ITA) enhances the enzymatic activity of UBR5 by alkylating the Cys2768 site, promoting the K48 ...
Huifan Liu+10 more
wiley +1 more source
scMGCL: accurate and efficient integration representation of single-cell multi-omics data. [PDF]
Cheng Z, Lu R, Zhang S.
europepmc +1 more source
Bringing the Human Genome and the Revolution in Bioinformatics to the Medical School Classroom
Jeffrey A. Magee+2 more
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RNA:(guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited – bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure [PDF]
Janusz M. Bujnicki, Leszek Rychlewski
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Cryptic Splicing of GAP43 mRNA is a Novel Hallmark of TDP‐43‐Associated ALS and AD
TDP‐43 dysfunction disrupts RNA processing, inducing cryptic exon 4a1 inclusion in GAP43 and reducing its protein levels. This aberrant splicing impairs axonal regeneration and contributes to neurodegeneration in ALS and AD. RNA‐seq of patient brains reveals GAP43 downregulation and 4a1 upregulation, identifying cryptic exon 4a1 as a potential ...
Mingming Yang+9 more
wiley +1 more source
Bridging artificial intelligence and biological sciences: a comprehensive review of large language models in bioinformatics. [PDF]
Lin A+19 more
europepmc +1 more source