Results 11 to 20 of about 635,426 (265)

Computing topological parameters of biological networks [PDF]

Bioinformatics, 2007
Abstract Summary: Rapidly increasing amounts of molecular interaction data are being produced by various experimental techniques and computational prediction methods. In order to gain insight into the organization and structure of the resultant large complex networks formed by the interacting molecules, we have developed the versatile ...
Assenov, Y., Ramírez, F., Schelhorn, S., Lengauer, T., Albrecht, M.   +4 more
openaire   +3 more sources

Analyzing biological network parameters with CentiScaPe [PDF]

Bioinformatics, 2009
Abstract Summary: The increasing availability of large network datasets along with the progresses in experimental high-throughput technologies have prompted the need for tools allowing easy integration of experimental data with data derived form network computational analysis. In order to enrich experimental data with network topological
Scardoni G, Petterlini M, LAUDANNA, Carlo   +2 more
openaire   +3 more sources

Working Group on Biological Parameters (WGBIOP) [PDF]

, 2019
The main objective of the Working Group on Biological Parameters (WGBIOP) is to review the status, issues, developments, and quality assurance of biological parameters for use in assessments and management that are in line with the requirements of end-users.
Godiksen, Jane Aanestad, Allegaert, Wim, Basilone, Gualtiero, Beier, Ulrika, Bekaert, Karen, Berg, Florian, Blass, Martina, Canha, Ângela, Carbonara, Pierluigi, Davies, Julie Coad; id_orcid 0000-0002-0616-7333, Dubroca, Laurent, Finnbogadóttir, Guðrún, Follesa, Maria Cristina, Gault, Mandy, Gillespie-Mules, Ruadhan, Gonçalves, Marta, Haase, Stefanie, Hilvarsson, Annelie, Hüssy, Karin; id_orcid 0000-0002-1993-6146, Kaljuste, Marju, Korta, Maria, Kousteni , Vasiliki, Krüger-Johnsen, Maria; id_orcid 0000-0001-6684-1716, Krumme, Uwe, Landa, Jorge, Lundgaard, Louise S., Mahe, Kélig, Maxwell, David, Mirny, Zuzanna, Chonchúir, Gráinne Ní, Nunes, Cristina, Rodriguez, Alfonso Perez, Pinto, Carlos, Songer, Sally, Torres Cutillas, Pedro, Ulleweit, Jens, van Damme, Cindy, Visconti, Valerio, Vitale, Francesca   +38 more
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Setting Parameters for Biological Models With ANIMO [PDF]

Electronic Proceedings in Theoretical Computer Science, 2014
ANIMO (Analysis of Networks with Interactive MOdeling) is a software for modeling biological networks, such as e.g. signaling, metabolic or gene networks. An ANIMO model is essentially the sum of a network topology and a number of interaction parameters.
Stefano Schivo, Jetse Scholma, Marcel Karperien, Janine N. Post, Jaco van de Pol, Rom Langerak   +5 more
openaire   +3 more sources

Identification of parameter correlations for parameter estimation in dynamic biological models [PDF]

BMC Systems Biology, 2013
One of the challenging tasks in systems biology is parameter estimation in nonlinear dynamic models. A biological model usually contains a large number of correlated parameters leading to non-identifiability problems. Although many approaches have been developed to address both structural and practical non-identifiability problems, very few studies ...
Pu Li 0001, Quoc Dong Vu
openaire   +2 more sources

Biological passport parameters [PDF]

Journal of Human Sport and Exercise, 2011
For long time anti-doping authorities have tried to find a way to tackle the use of forbidden substances and methods (namely erythropoiesis stimulating agents and blood transfusion) which improve sport performance through an increase of red cells and therefore oxygen transfer.
openaire   +2 more sources

Dynamics of biological parameters of spawners of pacific salmons returned to the rivers of the Avachinsky Bay (south-eastern Kamchatka) in 1989-2014

Известия ТИНРО, 2016
Dynamics of biological parameters for adults of chum, sockeye, pink, coho, and chinook salmons in the rivers of the Avachinsky Bay is analyzed. There is shown for three populations of sockeye salmon that general age of the returned adults correlates ...
Oleg M. Zaporozhets, Galina V. Zaporozhets, Zhanna Kh. Zorbidi   +2 more
doaj   +1 more source

PhysiCOOL: A generalized framework for model Calibration and Optimization Of modeLing projects

GigaByte, 2023
In silico models of biological systems are usually very complex and rely on a large number of parameters describing physical and biological properties that require validation. As such, parameter space exploration is an essential component of
Inês G. Gonçalves , David A. Hormuth II, Sandhya Prabhakaran , Caleb M. Phillips , José Manuel García-Aznar   +4 more
doaj   +1 more source

An improved swarm optimization for parameter estimation and biological model selection. [PDF]

PLoS ONE, 2013
One of the key aspects of computational systems biology is the investigation on the dynamic biological processes within cells. Computational models are often required to elucidate the mechanisms and principles driving the processes because of the ...
Afnizanfaizal Abdullah, Safaai Deris, Mohd Saberi Mohamad, Sohail Anwar   +3 more
doaj   +1 more source

Structure of run, abundance and biological characteristics of hatchery and wild chum salmon in the basin of the Paratunka River (southeastern Kamchatka) in 2010-2015

Известия ТИНРО, 2017
Some biological parameters of chum salmon in the spawning runs to the Paratunka River (Avachinsky Bay, Kamchatka) are analyzed on the materials of ichthyological researches conducted in 2010-2015 (3699 specimens sampled), observations on filling of the ...
Galina V. Zaporozhets, Oleg M. Zaporozhets   +1 more
doaj   +1 more source