Results 211 to 220 of about 2,453,647 (296)

Clustering the protein universe of life using DIAMOND DeepClust. [PDF]

Nat Methods
Buchfink BJ, Barbé É, Ashkenazy H, Reuter K, Kennedy JA, Drost HG.   +5 more
europepmc   +1 more source

Tumor‐stromal crosstalk and macrophage enrichment are associated with chemotherapy response in bladder cancer

FEBS Open Bio, EarlyView.
Chemoresistance in bladder cancer: Macrophage recruitment associated with CXCL1, CXCL5 and CXCL8 expression is characteristic of Gemcitabine/Cisplatin (Gem/Cis) Non‐Responder tumors (right side) while Responder tumors did not show substantial tumor‐stromal crosstalk (left side). All biological icons are attributed to Bioicons: carcinoma, cancerous‐cell‐
Sophie Leypold, Janik Riese, Lancelot Seillier, Mark Kühnel, Julia Pannhausen, Charlotte O. J. Fröhlich, Christian Martin, Peter Boor, Matthias Saar, Danny D. Jonigk, Nadine T. Gaisa, Michael Rose   +11 more
wiley   +1 more source

AEGIS: Individual-based modeling of life history evolution. [PDF]

PLoS Comput Biol
Bagic M, Šajina A, Bradshaw WJ, Valenzano DR.   +3 more
europepmc   +1 more source

Training young scientist on biochemistry and molecular biology methods in the laboratory; Training young scientist on experimental methods for studying YAP/TEAD and NFkB

Training young scientist on biochemistry and molecular biology methods in the laboratory. Training young scientist on experimental methods for studying YAP/TEAD and NFkB.
openaire   +1 more source

Polarization‐resolved femtosecond Vis/IR spectroscopy tailored for resolving weak signals in biological samples using minimal sample volume

FEBS Open Bio, EarlyView.
Unique biological samples, such as site‐specific mutant proteins, are available only in limited quantities. Here, we present a polarization‐resolved transient infrared spectroscopy setup with referencing to improve signal‐to‐noise tailored towards tracing small signals. We provide an overview of characterizing the excitation conditions for polarization‐
Clark Zahn, Karsten Heyne
wiley   +1 more source

A Reference-Free Algorithm Discovers Regulation in the Plant Transcriptome. [PDF]

Plant Direct
Meyer E, Saldivar EV, Kokot M, Xue B, Deorowicz S, Rhee SY, Salzman J.   +6 more
europepmc   +1 more source

Microglial dynamics and ferroptosis induction in human iPSC‐derived neuron–astrocyte–microglia tri‐cultures

FEBS Open Bio, EarlyView.
A tri‐culture of iPSC‐derived neurons, astrocytes, and microglia treated with ferroptosis inducers as an Induced ferroptosis model was characterized by scRNA‐seq, cell survival, and cytokine release assays. This analysis revealed diverse microglial transcriptomic changes, indicating that the system captures key aspects of the complex cellular ...
Hongmei Lisa Li, Hiroko Ohmiya, Sou Sakamoto, Masato Yugami, Akiko Oki, Makoto Furusawa, Yan Ling   +6 more
wiley   +1 more source

SpliceHarmonization: an integrated method for identifying RNA splicing events in therapeutics for splicing modulation. [PDF]

Bioinformatics
Chen Y, Zhang H, Sun YH, Negi S, Cao S, Ouyang Z, Zhang B, Hurt J, Huh D.   +8 more
europepmc   +1 more source

Multi‐omics and low‐input proteomics profiling reveals dynamic regulation driving pluripotency initiation in early mouse embryos

FEBS Open Bio, EarlyView.
Mouse pre‐implantation development involves a transition from totipotency to pluripotency. Integrating transcriptomics, epigenetic profiling, low‐input proteomics and functional assays, we show that eight‐cell embryos retain residual totipotency features, whereas cytoskeletal remodeling regulated by the ubiquitin‐proteasome system drives progression ...
Wanqiong Li, Xi Xiao, Lingbin Qi, Chanyi Li, Sirui Song, Jiaying Qin, Zhigang Xue, Jinfeng Xue, Huaifang Li   +8 more
wiley   +1 more source

Visualizing the multidimensional landscape of biological variation in modern microscopy. [PDF]

Front Bioinform
Müller GF, Göpel T, Scherf N, Huisken J.   +3 more
europepmc   +1 more source