Results 11 to 20 of about 11,341,390 (298)

Inference of a probabilistic Boolean network from a single observed temporal sequence [PDF]

open access: yes, 2007
The inference of gene regulatory networks is a key issue for genomic signal processing. This paper addresses the inference of probabilistic Boolean networks (PBNs) from observed temporal sequences of network states.
Xiao, Y.   +3 more
core   +3 more sources

Random Networks with Quantum Boolean Functions

open access: yesMathematics, 2021
We propose quantum Boolean networks, which can be classified as deterministic reversible asynchronous Boolean networks. This model is based on the previously developed concept of quantum Boolean functions.
Mario Franco   +3 more
doaj   +1 more source

Boolean Networks as Modeling Framework [PDF]

open access: yesFrontiers in Plant Science, 2012
In a network, the components of a given system are represented as nodes, the interactions are abstracted as links between the nodes. Boolean networks refer to a class of dynamics on networks, in fact it is the simplest possible dynamics where each node has a value 0 or 1.
Florian eGreil, Florian eGreil
openaire   +4 more sources

Inferring context-sensitive probablistic boolean networks from gene expression data under multi-biological conditions [PDF]

open access: yes, 2007
In recent years biological microarrays have emerged as a high-throughput data acquisition technology in bioinformatics. In conjunction with this, there is an increasing need to develop frameworks for the formal analysis of biological pathways. A modeling
Marshall, Stephen, Yu, Le
core   +3 more sources

Reconstructing Boolean Models of Signaling [PDF]

open access: yesJournal of Computational Biology, 2012
Since the first emergence of protein-protein interaction networks more than a decade ago, they have been viewed as static scaffolds of the signaling-regulatory events taking place in cells, and their analysis has been mainly confined to topological aspects.
Roded Sharan, Richard M. Karp
openaire   +4 more sources

Fundamental Boolean network modelling for childhood acute lymphoblastic leukaemia pathways

open access: yesQuantitative Biology, 2022
Background A novel data‐driven Boolean model, namely, the fundamental Boolean model (FBM), has been proposed to draw genetic regulatory insights into gene activation, inhibition, and protein decay, published in 2018.
Leshi Chen   +2 more
doaj   +1 more source

Boolean universes above Boolean models [PDF]

open access: yesJournal of Symbolic Logic, 1993
AbstractWe establish several first- or second-order properties of models of first-order theories by considering their elements as atoms of a new universe of set theory and by extending naturally any structure of Boolean model on the atoms to the whole universe. For example, completef-rings are “boundedly algebraically compact” in the language (+, −, ·,
openaire   +4 more sources

Approximate Quantifier Elimination for Propositional Boolean Formulae [PDF]

open access: yes, 2011
This paper describes an approximate quantifier elimination procedure for propositional Boolean formulae. The method is based on computing prime implicants using SAT and successively refining over-approximations of a given formula.
Lijun Zhang   +9 more
core   +1 more source

Dynamical Analysis of the Regulatory Network Controlling Natural Killer Cells Differentiation

open access: yesFrontiers in Physiology, 2018
Many disease fighting strategies have focused on the generation of NK cells, since they constitute the main immune barrier against cancer and intracellular pathogens such as viruses.
Adhemar J. Liquitaya-Montiel   +2 more
doaj   +1 more source

Boolean model of visceral adipose tissue

open access: yes, 2022
In this repository is presented the implementation of boolean models of adipocytes, macrophages and resident CD4+ T lymphocytes of human visceral adipose tissue.
Antonio Bensussen
core   +1 more source

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