Results 11 to 20 of about 66,193 (232)

Multi-environment BSA-seq using large F3 populations is able to achieve reliable QTL mapping with high power and resolution: An experimental demonstration in rice

Crop Journal
Bulked-segregant analysis by deep sequencing (BSA-seq) is a widely used method for mapping QTL (quantitative trait loci) due to its simplicity, speed, cost-effectiveness, and efficiency.
Weiren Wu, Lihui Lin, Xiaofang Xie
exaly   +3 more sources

Identification of QTLs and new candidate genes affecting ear shank length via BSA-seq and transcriptomic analysis in maize [PDF]

Frontiers in Plant Science
IntroductionThe ear shank, a short branch connecting the stalk and the ear, represented a key agronomic trait influenced both yield and plant architecture in maize, yet the molecular mechanism remained not fully understood.MethodsIn this study, BSA-seq ...
Hongzhou An, Kuiying Li, Xiaolan Liu, Yuhua Wu, Jianhan He, Yanbing Wang, Zengyu Gao   +6 more
doaj   +2 more sources

Identification of candidate genes controlling chilling tolerance of rice in the cold region at the booting stage by BSA-Seq and RNA-Seq [PDF]

Royal Society Open Science, 2020
Rice is sensitive to low temperatures, specifically at the booting stage. Chilling tolerance of rice is a quantitative trait loci that is governed by multiple genes, and thus, its precise identification through the conventional methods is an arduous task.
Pan Guojun, Guo Zhenhua, Cai Lijun
exaly   +2 more sources

Identification of Dwarfing Candidate Genes in Brassica napus L. LSW2018 through BSA–Seq and Genetic Mapping [PDF]

Plants
Plant height, as a crucial component of plant architecture, exerts a significant influence on rapeseed (Brassica napus L.) lodging resistance, photosynthetic efficiency, yield, and mechanized harvest level.
Sha Huang, Fang Wang, Yang Li, Zhuanzhuan Wang, Ruimao Zhang, Jijun Li, Chao Li   +6 more
doaj   +2 more sources

Combined BSA-seq and RNA-seq approaches reveal candidate genes associated with seed weight in Brassica napus [PDF]

Frontiers in Plant Science
Brassica napus, a globally significant oilseed crop of the Brassicaceae family, serves as a major source of vegetable oil and biofuel. Seed size/weight is a crucial agronomic trait that directly determines crop yield.
Xinxin Geng, Xinxin Geng, Xinxin Geng, Fengling Yang, Fengling Yang, Fengling Yang, Wenhua Tang, Wenhua Tang, Wenhua Tang, Ying Wang, Ying Wang, Ying Wang, Shan Fu, Shan Fu, Shan Fu, Zichen Yu, Zichen Yu, Zichen Yu, Wanli Cheng, Wanli Cheng, Wanli Cheng, Liang Chen, Liang Chen, Liang Chen, Xiaomeng Xue, Xiaomeng Xue, Xiaomeng Xue   +26 more
doaj   +2 more sources

RETRACTED ARTICLE: Identification of candidate genes associated with double flowers via integrating BSA-seq and RNA-seq in Brassica napus

BMC Genomics
As a Brassica crop, Brassica napus typically has single flowers that contain four petals. The double-flower phenotype of rapeseed has been a desirable trait in China because of its potential commercial value in ornamental tourism.
Xiaowei Ma, Liangmiao Fan, Shenhua Ye, Yanping Chen, Yingying Huang, Lumei Wu, Lun Zhao, Bin Yi, Chaozhi Ma, Jinxing Tu, Jinxiong Shen, Tingdong Fu, Jing Wen   +12 more
doaj   +2 more sources

Revealing the key role of the folate synthesis regulatory gene DHNA in tobacco leaf yellowing based on BSA-seq, RNA-seq, and proteomic sequencing [PDF]

BMC Plant Biology
Background The degree of yellowing in tobacco leaves is an important indicator for determining the maturity and harvesting time of tobacco leaves. Decreasing chlorophyll levels helps speed up the ripening process of tobacco leaves for easier mechanical ...
Qiuhe Pan, Rongli Jia, Kai Pi, Qin Tang, Jingyao Zhang, Ying Huang, Renxiang Liu   +6 more
doaj   +2 more sources

Mapping of a QTL associated with sucrose content in peanut kernels using BSA-seq. [PDF]

Front Genet, 2022
As an important factor affecting the edible quality of peanut kernels, sucrose content is a complex quantitative trait regulated by multiple factors. In this study, an F2 segregating population and a recombinant inbred line (RIL) population, derived from a cross between the high sucrose content variety Jihuatian 1 and the low sucrose content line ...
Guo J, Qi F, Qin L, Zhang M, Sun Z, Li H, Cui M, Zhang M, Li C, Li X, Zhao Q, Luo D, Tian M, Liu H, Xu J, Miao L, Huang B, Dong W, Han S, Zhang X.   +19 more
europepmc   +4 more sources

Identification of Potential Candidate Dwarf Genes in Maize by BSA-Seq and Transcriptomic Analyses. [PDF]

Plants (Basel)
Maize (Zea mays L.) is a globally important crop. Understanding plant height and the underlying dwarfing genes is of critical importance for improving lodging resistance and optimizing plant architecture. In this study, a dwarf mutant designated CM17-2 was obtained by exposing the maize inbred line B73 to carbon ion beam irradiation.
Zhang L, Zhou Y, Zhuang Z, Bian J, Hao X, Ren Z, Ta W, Peng Y.   +7 more
europepmc   +2 more sources

Harnessing the potential of bulk segregant analysis sequencing and its related approaches in crop breeding

Frontiers in Genetics, 2022
Most plant traits are governed by polygenes including both major and minor genes. Linkage mapping and positional cloning have contributed greatly to mapping genomic loci controlling important traits in crop species. However, they are low-throughput, time-
Aasim Majeed, Prerna Johar, Aamir Raina, R. K. Salgotra, Xianzhong Feng, Javaid Akhter Bhat, Javaid Akhter Bhat   +6 more
doaj   +1 more source