Oral and Gut Microbial Carbohydrate-Active Enzymes Landscape in Health and Disease [PDF]
Inter-individual variability in the microbial gene complement encoding for carbohydrate-active enzymes (CAZymes) can profoundly regulate how the host interacts with diverse carbohydrate sources thereby influencing host health. CAZy-typing, characterizing
Stanley O. Onyango +3 more
doaj +2 more sources
As the co-enzyme of pyruvate formate-lyase under ruminal anaerobic condition, thiamine plays a critical role in carbohydrate metabolism in dairy cows.
Yiguang Zhao +8 more
doaj +3 more sources
dbCAN3: automated carbohydrate-active enzyme and substrate annotation
Abstract Carbohydrate active enzymes (CAZymes) are made by various organisms for complex carbohydrate metabolism. Genome mining of CAZymes has become a routine data analysis in (meta-)genome projects, owing to the importance of CAZymes in bioenergy, microbiome, nutrition, agriculture, and global carbon recycling.
Jinfang Zheng +5 more
openaire +4 more sources
Using Carbohydrate Interaction Assays to Reveal Novel Binding Sites in Carbohydrate Active Enzymes. [PDF]
Carbohydrate active enzymes often contain auxiliary binding sites located either on independent domains termed carbohydrate binding modules (CBMs) or as so-called surface binding sites (SBSs) on the catalytic module at a certain distance from the active ...
Darrell Cockburn +6 more
doaj +6 more sources
Apiospora arundinis, a panoply of carbohydrate-active enzymes and secondary metabolites [PDF]
The Apiospora genus comprises filamentous fungi with promising potential, though its full capabilities remain undiscovered. In this study, we present the first genome assembly of an Apiospora arundinis isolate, demonstrating a highly complete and ...
Trine Sørensen +11 more
doaj +2 more sources
Regulating Strategies for Producing Carbohydrate Active Enzymes by Filamentous Fungal Cell Factories [PDF]
Filamentous fungi are important eukaryotic organisms crucial in substrate degradation and carbon cycle on the earth and have been harnessed as cell factories for the production of proteins and other high value-added products in recent decades.
Teng Zhang +5 more
doaj +2 more sources
Carbohydrate-active enzymes from pigmented
Background Spore-forming Bacilli are Gram-positive bacteria commonly found in a variety of natural habitats, including soil, water and the gastro-intestinal (GI)-tract of animals. Isolates of various Bacillus species produce pigments, mostly carotenoids,
Henrissat Bernard +5 more
doaj +3 more sources
CAZyme3D: A Database of 3D Structures for Carbohydrate-active Enzymes. [PDF]
AbstractCAZymes (CarbohydrateActive EnZymes) degrade, synthesize, and modify all complex carbohydrates on Earth. CAZymes are extremely important to research in human health, nutrition, gut microbiome, bioenergy, plant disease, and global carbon recycling. Current CAZyme annotation tools are all based on sequence similarity.
Siva Shanmugam NR, Yin Y.
europepmc +4 more sources
Carbohydrate-active enzymes in animal feed
Considering an ever-growing global population, which hit 8 billion people in the fall of 2022, it is essential to find solutions to avoid the competition between human food and animal feed for croplands. Agricultural co-products have become important components of the circular economy with their use in animal feed.
Plouhinec, Lauriane +3 more
openaire +4 more sources
The phenomenon of degeneration of industrial Trichoderma reesei strains
Background Even if the loss of production capacity of a microorganism is said to be a serious problem in various biotechnology industries, reports in literature are rather rare. Strains of the genera Trichoderma reesei are used for large-scale production
R. Martzy +4 more
doaj +1 more source

