Genome-Wide Comparison of Carbohydrate-Active Enzymes (CAZymes) Repertoire of Flammulina ononidis
Mycobiology, 2018 Whole-genome sequencing of Flammulina ononidis, a wood-rotting basidiomycete, was performed to identify genes associated with carbohydrate-active enzymes (CAZymes). A total of 12,586 gene structures with an average length of 2009 bp were predicted by the
Young-Jin Park, Won-Sik Kong
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CAZac: an activity descriptor for carbohydrate-active enzymes. [PDF]
Nucleic Acids ResAbstract The Carbohydrate-Active enZYme database (CAZy; www.cazy.org) has been providing the reference classification of carbohydrate-active enzymes (CAZymes) for >30 years. Based on literature survey, the sequence-based families of CAZymes are enriched with functional data by using the International Union of Biochemistry and ...
Lombard V, Henrissat B, Garron ML.
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The carbohydrate-active enzyme database: functions and literature [PDF]
Nucleic Acids Research, 2021 Abstract Thirty years have elapsed since the emergence of the classification of carbohydrate-active enzymes in sequence-based families that became the CAZy database over 20 years ago, freely available for browsing and download at www.cazy.org.
Drula, Elodie +5 more
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The phenomenon of degeneration of industrial Trichoderma reesei strains
Biotechnology for Biofuels, 2021 Background Even if the loss of production capacity of a microorganism is said to be a serious problem in various biotechnology industries, reports in literature are rather rare. Strains of the genera Trichoderma reesei are used for large-scale production
R. Martzy +4 more
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A fluorescent reporter system for anaerobic thermophiles
Frontiers in Bioengineering and Biotechnology, 2023 Owing to their inherent capacity to make invisible biological processes visible and quantifiable, fluorescent reporter systems have numerous applications in biotechnology. For classical fluorescent protein systems (i.e., GFP and derivatives), chromophore
Rémi Hocq +7 more
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Carbohydrate-active enzymes in animal feed
Biotechnology Advances, 2023 Considering an ever-growing global population, which hit 8 billion people in the fall of 2022, it is essential to find solutions to avoid the competition between human food and animal feed for croplands. Agricultural co-products have become important components of the circular economy with their use in animal feed.
Plouhinec, Lauriane +3 more
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Carbohydrate-Active Enzymes: Structure, Activity, and Reaction Products. [PDF]
Int J Mol Sci, 2020 Carbohydrate-active enzymes are responsible for both the biosynthesis and breakdown of carbohydrates and glycoconjugates [...]
Benini S.
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Global Distribution of Carbohydrate Utilization Potential in the Prokaryotic Tree of Life
mSystems, 2022 Microorganisms dominate all ecosystems on Earth and play a key role in the turnover of organic matter. By producing enzymes, they degrade complex carbohydrates, facilitating the recycling of nutrients and controlling the carbon cycle.
Rubén López-Mondéjar +3 more
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The many functions of carbohydrate-active enzymes in family GH65: diversity and application. [PDF]
Appl Microbiol BiotechnolDe Beul E, Franceus J, Desmet T.
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CAZyme3D: A Database of 3D Structures for Carbohydrate-active Enzymes. [PDF]
J Mol BiolAbstract CAZymes ( C arbohydrate A ctive En Zymes ) degrade, synthesize, and modify all complex carbohydrates on Earth.
Siva Shanmugam NR, Yin Y.
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