Results 1 to 10 of about 879 (132)
Gut microbial CAZymes markers for depression
Translational Psychiatry, 2023 Major depressive disorder (MDD) is a serious mental illness, characterized by disturbances of gut microbiome, it is required to further explore how the carbohydrate-active enzymes (CAZymes) were changed in MDD.
Peijun Xie +16 more
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N-glycan breakdown by bacterial CAZymes
Essays in Biochemistry, 2023 Abstract The modification of proteins by N-glycans is ubiquitous to most organisms and they have multiple biological functions, including protecting the adjoining protein from degradation and facilitating communication or adhesion between cells, for example. Microbes have evolved CAZymes to deconstruct different types of N-glycans and
Lucy Isobel Crouch +1 more
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Innovations in CAZyme gene diversity and its modification for biorefinery applications
Biotechnology Reports, 2020 For sustainable growth, concept of biorefineries as recourse to the “fossil derived” energy source is important. Here, the Carbohydrate Active enZymes (CAZymes) play decisive role in generation of biofuels and related sugar-based products utilizing ...
Dixita Chettri +2 more
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Identification of Allobaculum mucolyticum as a novel human intestinal mucin degrader
Gut Microbes, 2021 The human gut microbiota plays a central role in intestinal health and disease. Yet, many of its bacterial constituents are functionally still largely unexplored.
Guus H. van Muijlwijk +7 more
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Journal of Fungi, 2022 Early-diverging fungi (EDF) are ubiquitous and versatile. Their diversity is reflected in their genome sizes and complexity. For instance, multiple protein families have been reported to expand or disappear either in particular genomes or even whole ...
Małgorzata Orłowska, Anna Muszewska
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Genome Sequence Analysis of Auricularia heimuer Combined with Genetic Linkage Map
Journal of Fungi, 2020 Auricularia heimuer is one of the most popular edible fungi in China. In this study, the whole genome of A. heimuer was sequenced on the Illumina HiSeq X system and compared with other mushrooms genomes.
Ming Fang +7 more
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iCAZyGFADB: an insect CAZyme and gene function annotation database
Database, 2023 Abstract With the continuous upgrading of high-throughput sequencing technology, a large amount of biological genome data has been deciphered and published. The research on functional genes of biological genomes urgently needs a collection of service websites with user-friendly and full annotation functions for a variety of gene function
Chun Fu, Yaojun Yang
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In silicomodelling of the function of disease-related CAZymes
Essays in Biochemistry, 2023 AbstractIn silico modelling of proteins comprises a diversity of computational tools aimed to obtain structural, electronic, and/or dynamic information about these biomolecules, capturing mechanistic details that are challenging to experimental approaches, such as elusive enzyme-substrate complexes, short-lived intermediates, and reaction transition ...
Nin-Hill, Alba +2 more
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cazy_webscraper: local compilation and interrogation of comprehensive CAZyme datasets
Microbial Genomics, 2022 Carbohydrate active enzymes (CAZymes) are pivotal in biological processes including energy metabolism, cell structure maintenance, signalling, and pathogen recognition. Bioinformatic prediction and mining of CAZymes improves our understanding of these activities and enables discovery of candidates of interest for industrial ...
Emma E. M. Hobbs +2 more
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G3: Genes, Genomes, Genetics, 2020 Floccularia luteovirens, also known as “Yellow mushroom”, is an edible ectomycorrhizal fungus widely distributed in the Qinghai-Tibet Plateau alpine meadow. So far, little genomic information is known about F.
Xiaolong Gan +6 more
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