Results 31 to 40 of about 879 (132)

Carbohydrate-Active enZyme (CAZyme) enabled glycoengineering for a sweeter future

Current Opinion in Biotechnology, 2020
One of the stumbling blocks to advance the field of glycobiology has been the difficulty in synthesis of bespoke carbohydrate-based molecules like glycopolymers (e.g. human milk oligosaccharides) and glycoconjugates (e.g. glycosylated monoclonal antibodies).
Chandra Kanth Bandi, Ayushi Agrawal, Shishir PS Chundawat   +2 more
openaire   +3 more sources

Transcriptome and proteome analysis reveals the characteristics of carbon metabolism in the mycelial development of Gomphus purpuraceus

Food Science and Human Wellness
Gomphus purpuraceus is an ancient wild edible mushroom. However, the niche and lignocellulose degradation system of G. purpuraceus have remained cryptic. In the current study, transcriptome and proteome sequencing of G.
Yangyang Geng, Shixin Zhang, Yana Liu, Likang Qin   +3 more
doaj   +1 more source

Genome analysis and CAZy repertoire of a novel fungus Aspergillus sydowii C6d with lignocellulolytic ability isolated from camel rumen

Electronic Journal of Biotechnology, 2022
Background: Camels are known for their survival under harsh and nutrient-deficient climates. Camel rumen ecosystem presents a unique opportunity to study the ruminal microbes helping the camel in this task.
Nilam J. Tulsani, Subhash J. Jakhesara, Ankit T. Hinsu, Basanti Jyotsana, Nishant A. Dafale, Niteen V. Patil, Hemant J. Purohit, Chaitanya G. Joshi   +7 more
doaj   +1 more source

Ruminal microbiota, carbohydrate-active enzymes and milk bioactive compounds in Italian Mediterranean dairy buffaloes fed total mixed ration with or without green forage

Italian Journal of Animal Science
The aim of the present study was to determine the effect of including green forage in the diet of Italian Mediterranean dairy buffaloes on the ruminal microbiota, CAZymes profile, functional biomolecules and total antioxidant activity in bulk milk ...
Angela Salzano, Anella Saggese, Elisa Martino, Gianluca Neglia, Martina Cascone, Matteo Selci, Loredana Baccigalupi, Nunzia D’Onofrio, Donato Giovannelli, Giovanna Bifulco, Ezio Ricca, Maria Luisa Balestrieri, Michael D’Occhio, Giuseppe Campanile   +13 more
doaj   +1 more source

Genome sequence and Carbohydrate Active Enzymes (CAZymes) repertoire of the thermophilic Caldicoprobacter algeriensis TH7C1T

Microbial Cell Factories, 2022
Background Omics approaches are widely applied in the field of biology for the discovery of potential CAZymes including whole genome sequencing. The aim of this study was to identify protein encoding genes including CAZymes in order to understand glycans-
Rihab Ameri, José Luis García, Amel Bouanane Derenfed, Nathalie Pradel, Sawssan Neifar, Sonia Mhiri, Monia Mezghanni, Nadia Zaraî Jaouadi, Jorge Barriuso, Samir Bejar   +9 more
doaj   +1 more source

Genome-wide identification reveals conserved carbohydrate-active enzyme repertoire in termites

Frontiers in Forests and Global Change, 2023
Termites play an important role as decomposers of organic matter in forests by utilizing their gut symbionts and associated carbohydrate-active enzymes (CAZymes) to digest wood materials. However, there is a limited understanding of the entire repertoire
Shulin He, Amrita Chakraborty, Fei Li, Cao Zhou, Binchuan Zhang, Bin Chen, Bin Jiang   +6 more
doaj   +1 more source

A Metagenome‐Assembled Genome Catalog From the Global Ruminant Microbiomes

Animal Research and One Health, EarlyView.
The Ruminant Gastrointestinal MAG Catalog (RGMC) is a comprehensive global resource offering 40,812 strain‐level genomes across 53 bacterial and 4 archaeal classes. It greatly surpasses prior efforts in scale and diversity, serving as an essential foundation for research in ruminant nutrition, microbial function, and methane mitigation.
Shizhe Zhang, Qiushuang Li, Bingzi Ouyang, Wenxing Wang, Xiang Zhou, Xiumin Zhang, Rong Wang, Zhiliang Tan, Min Wang   +8 more
wiley   +1 more source

Viruses in the sediments around the trenches harbor diverse survival mechanisms

iMetaOmics, EarlyView.
Deep‐sea trenches are the deepest and most isolated environments in the global ocean but the diversity and adaptation of the viral communities remain poorly characterized. In this study, 5563 viral operational taxonomic units (vOTUs) were identified from sediments of the Yap Trench and Western Caroline Basin.
Yue Su, Hao Yu, Shujuan Sun, Kaiyang Zheng, Ziyue Wang, Chen Gao, Guangxue Li, Xiaoshou Liu, Hongbing Shao, David Paez‐Espino, Andrew McMinn, Yantao Liang, Min Wang   +12 more
wiley   +1 more source

Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts

Frontiers in Plant Science, 2014
Cell walls are barriers that impair colonization of host tissues, but also are important reservoirs of energy-rich sugars. Growing hyphae of necrotrophic fungal pathogens, such as Botrytis cinerea (Botrytis, henceforth), secrete enzymes that disassemble ...
Barbara eBlanco-Ulate, Abraham eMorales-Cruz, Katherine C H Amrine, John Marcus Labavitch, Ann ePowell, Dario eCantu   +5 more
doaj   +1 more source

Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi

Journal of Fungi, 2023
Plant biomass is one of the most abundant renewable carbon sources, which holds great potential for replacing current fossil-based production of fuels and chemicals.
Jiajia Li, Ad Wiebenga, Anna Lipzen, Vivian Ng, Sravanthi Tejomurthula, Yu Zhang, Igor V. Grigoriev, Mao Peng, Ronald P. de Vries   +8 more
doaj   +1 more source