Results 11 to 20 of about 10,832 (224)
Innovations in CAZyme gene diversity and its modification for biorefinery applications
Biotechnology Reports, 2020 For sustainable growth, concept of biorefineries as recourse to the “fossil derived” energy source is important. Here, the Carbohydrate Active enZymes (CAZymes) play decisive role in generation of biofuels and related sugar-based products utilizing ...
Dixita Chettri +2 more
doaj +3 more sources
iCAZyGFADB: an insect CAZyme and gene function annotation database
Database, 2023 Abstract With the continuous upgrading of high-throughput sequencing technology, a large amount of biological genome data has been deciphered and published. The research on functional genes of biological genomes urgently needs a collection of service websites with user-friendly and full annotation functions for a variety of gene function
Chun Fu, Yaojun Yang
openaire +2 more sources
In silicomodelling of the function of disease-related CAZymes
Essays in Biochemistry, 2023 AbstractIn silico modelling of proteins comprises a diversity of computational tools aimed to obtain structural, electronic, and/or dynamic information about these biomolecules, capturing mechanistic details that are challenging to experimental approaches, such as elusive enzyme-substrate complexes, short-lived intermediates, and reaction transition ...
Nin-Hill, Alba +2 more
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cazy_webscraper: local compilation and interrogation of comprehensive CAZyme datasets
Microbial Genomics, 2022 Carbohydrate active enzymes (CAZymes) are pivotal in biological processes including energy metabolism, cell structure maintenance, signalling, and pathogen recognition. Bioinformatic prediction and mining of CAZymes improves our understanding of these activities and enables discovery of candidates of interest for industrial ...
Emma E. M. Hobbs +2 more
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Analysis of fungal high-mannose structures using CAZymes
Glycobiology, 2021 Abstract Glycoengineering ultimately allows control over glycosylation patterns to generate new glycoprotein variants with desired properties. A common challenge is glycan heterogeneity, which may affect protein function and limit the use of key techniques such as mass spectrometry. Moreover, heterologous protein expression can introduce
Bartłomiej M Kołaczkowski +8 more
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Rumen cellulosomics : divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains [PDF]
, 2014 Peer reviewedPublisher ...
Bayer, Edward A +12 more
core +8 more sources
Mycobiology, 2020 The carbohydrate-active enzyme (CAZyme) genes of Trametes contribute to polysaccharide degradation. However, the comprehensive analysis of the composition of CAZymes and the biosynthetic gene clusters (BGCs) of Trametes remain unclear. Here, we conducted
Yan Zhang +7 more
doaj +1 more source
Biotechnology for Biofuels and Bioproducts, 2023 Background Penicillium funiculosum NCIM1228 is a filamentous fungus that was identified in our laboratory to have high cellulolytic activity. Analysis of its secretome suggested that it responds to different carbon substrates by secreting specific ...
Nandita Pasari +4 more
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Bioinformatic characterisation of genes encoding cell wall degrading enzymes in the Phytophthora parasitica genome [PDF]
, 2014 BACKGROUND: A critical aspect of plant infection by the majority of pathogens is penetration of the plant cell wall. This process requires the production and secretion of a broad spectrum of pathogen enzymes that target and degrade the many complex ...
Adrienne R Hardham +2 more
core +2 more sources
Potential and expression of carbohydrate utilization by marine fungi in the global ocean
Microbiome, 2021 Background Most of the research on the cycling of carbon in the open-ocean has focused on heterotrophic prokaryotes and eukaryotic phytoplankton, but the role of pelagic fungi remains largely enigmatic.
Federico Baltar +2 more
doaj +1 more source