Results 11 to 20 of about 7,080 (160)
Gut microbial CAZymes markers for depression
Translational Psychiatry, 2023 Major depressive disorder (MDD) is a serious mental illness, characterized by disturbances of gut microbiome, it is required to further explore how the carbohydrate-active enzymes (CAZymes) were changed in MDD.
Peng Xie, Peng Zheng, Wen Lu
exaly +4 more sources
Innovations in CAZyme gene diversity and its modification for biorefinery applications
Biotechnology Reports, 2020 For sustainable growth, concept of biorefineries as recourse to the “fossil derived” energy source is important. Here, the Carbohydrate Active enZymes (CAZymes) play decisive role in generation of biofuels and related sugar-based products utilizing ...
Dixita Chettri +2 more
doaj +3 more sources
Rhizospheric glycosyltransferase repertoires as a resource for enabling sustainable bioprocessing and green biocatalyst discovery [PDF]
Scientific ReportsThe rhizospheric microbiomes associated with wild plant species Moringa oleifera and Abutilon fruticosum, endemic to the arid northwestern Mecca region of Saudi Arabia, represent untapped reservoirs of genetic capability with significant implications for
Rewaa S. Jalal, Fatimah M. Alshehrei
doaj +2 more sources
CAMEO: a CAZyme mapping engine optimized for HUMAnN. [PDF]
Microbiol Resour AnnouncABSTRACT There are technical barriers to creating functional mapping databases and a dearth of validated databases that can be easily implemented by users. We present CAMEO, a precomputed and validated mapping file for carbohydrate-active enzymes, as well as an approach to building new CAZyme ...
Bolino MJ, Frese SA.
europepmc +2 more sources
Journal of Fungi, 2022 Early-diverging fungi (EDF) are ubiquitous and versatile. Their diversity is reflected in their genome sizes and complexity. For instance, multiple protein families have been reported to expand or disappear either in particular genomes or even whole ...
Małgorzata Orłowska, Anna Muszewska
doaj +1 more source
Genome Sequence Analysis of Auricularia heimuer Combined with Genetic Linkage Map
Journal of Fungi, 2020 Auricularia heimuer is one of the most popular edible fungi in China. In this study, the whole genome of A. heimuer was sequenced on the Illumina HiSeq X system and compared with other mushrooms genomes.
Ming Fang +7 more
doaj +1 more source
Identification of Allobaculum mucolyticum as a novel human intestinal mucin degrader
Gut Microbes, 2021 The human gut microbiota plays a central role in intestinal health and disease. Yet, many of its bacterial constituents are functionally still largely unexplored.
Guus H. van Muijlwijk +7 more
doaj +1 more source
In silicomodelling of the function of disease-related CAZymes
Essays in Biochemistry, 2023 AbstractIn silico modelling of proteins comprises a diversity of computational tools aimed to obtain structural, electronic, and/or dynamic information about these biomolecules, capturing mechanistic details that are challenging to experimental approaches, such as elusive enzyme-substrate complexes, short-lived intermediates, and reaction transition ...
Nin-Hill, Alba +2 more
openaire +4 more sources
cazy_webscraper: local compilation and interrogation of comprehensive CAZyme datasets
Microbial Genomics, 2022 Carbohydrate active enzymes (CAZymes) are pivotal in biological processes including energy metabolism, cell structure maintenance, signalling, and pathogen recognition. Bioinformatic prediction and mining of CAZymes improves our understanding of these activities and enables discovery of candidates of interest for industrial ...
Emma E. M. Hobbs +2 more
openaire +7 more sources
G3: Genes, Genomes, Genetics, 2020 Floccularia luteovirens, also known as “Yellow mushroom”, is an edible ectomycorrhizal fungus widely distributed in the Qinghai-Tibet Plateau alpine meadow. So far, little genomic information is known about F.
Xiaolong Gan +6 more
doaj +1 more source